DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11356 and arf-1

DIOPT Version :10

Sequence 1:NP_572786.3 Gene:CG11356 / 32178 FlyBaseID:FBgn0030375 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001367325.1 Gene:arf-1 / 175801 WormBaseID:WBGene00000182 Length:181 Species:Caenorhabditis elegans


Alignment Length:177 Identity:39/177 - (22%)
Similarity:76/177 - (42%) Gaps:21/177 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 EFQVLILGPSGSGKT------ELGHRLSRVSRDRDDQEATNGVRCYRMKSAEEPIAQLQLTEVGG 88
            |.::|::|...:|||      :||..::.:        .|.|   :.:::.|.......:.:|||
 Worm    17 EMRILMVGLDAAGKTTILYKLKLGEIVTTI--------PTIG---FNVETVEYKNISFTVWDVGG 70

  Fly    89 NVEMQRLWKHYYASSHALIYCFDLGADPMVMQGTFSLLTDCLVGTQLAGKPVLLVASRHRV--GV 151
            ..:::.||:||:.::..||:..|......|.:....|:. .|...:|....:|:.|::..:  .:
 Worm    71 QDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELMR-MLAEDELRDAVLLVFANKQDLPQAM 134

  Fly   152 QLYDVEYAFGLEELAKSCDCPLLICHMDETEDLHRGIRWLCHQLMAR 198
            ...:|....||..|..........| ....:.|:.|:.||.:||..|
 Worm   135 NAAEVTDKLGLHSLRNRSWYIQATC-ATSGDGLYEGLDWLSNQLKNR 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11356NP_572786.3 P-loop containing Nucleoside Triphosphate Hydrolases 32..194 CDD:476819 35/169 (21%)
arf-1NP_001367325.1 P-loop containing Nucleoside Triphosphate Hydrolases 5..179 CDD:476819 38/174 (22%)

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