DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11356 and arl5a

DIOPT Version :10

Sequence 1:NP_572786.3 Gene:CG11356 / 32178 FlyBaseID:FBgn0030375 Length:273 Species:Drosophila melanogaster
Sequence 2:XP_002936704.1 Gene:arl5a / 100490823 XenbaseID:XB-GENE-1004384 Length:179 Species:Xenopus tropicalis


Alignment Length:209 Identity:43/209 - (20%)
Similarity:81/209 - (38%) Gaps:41/209 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLLCAKLCDCCCYHQTISCCRTSSPAMEEFQVLILGPSGSGKTELGHRLSRVSRDRDDQEATNG 65
            ||:|.||:.....:              :|.:|:|:|...:|||.:.::.|  ..:......|.|
 Frog     1 MGILFAKIWRLFSH--------------QEHKVIIVGLDNAGKTTILYQFS--MNEVVHTSPTIG 49

  Fly    66 VRCYRMKSAEEPI---AQLQLTEVGGNVEMQRLWKHYYASSHALIYCFDLGADPMVMQGTFSLLT 127
                  .:.||.:   .:..:.::||...::..|..||.::..:|...| ..|...:..|...|.
 Frog    50 ------SNVEEIVVNNTRFLMWDIGGQESLRSSWNTYYTNTEFVIIVVD-STDRERIAVTREELY 107

  Fly   128 DCLVGTQLAGKPVLLVASRHRVGVQLYDVEYAFGLEELAKSC------DCP--LLICHMDETEDL 184
            ..|....|....:|:.|::.       ||:....:.|:::..      |.|  :..|.....|.|
 Frog   108 KMLSHEDLKKAGLLVFANKQ-------DVKECMTVAEISQYLKLTSVKDHPWHIQACCALTGEGL 165

  Fly   185 HRGIRWLCHQLMAR 198
            .:|:.|:..:|..|
 Frog   166 CQGLEWMMSRLKVR 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11356NP_572786.3 P-loop containing Nucleoside Triphosphate Hydrolases 32..194 CDD:476819 35/172 (20%)
arl5aXP_002936704.1 Arl5_Arl8 3..175 CDD:133353 39/201 (19%)

Return to query results.
Submit another query.