DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uch-L5R and ubh-4

DIOPT Version :9

Sequence 1:NP_572781.1 Gene:Uch-L5R / 32173 FlyBaseID:FBgn0030370 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001379065.1 Gene:ubh-4 / 174289 WormBaseID:WBGene00006724 Length:321 Species:Caenorhabditis elegans


Alignment Length:313 Identity:146/313 - (46%)
Similarity:208/313 - (66%) Gaps:11/313 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 TAANNWCLIESDPGVFTEMISGFGCTGAEVEEIWSIKADAFRHLEPIHGLIFLFKWLDDKPAGRV 84
            |.|.:||||||||||||||:.|||..|.:|||::|:..|. ....|.:||||||||........:
 Worm     2 TDAGSWCLIESDPGVFTEMLRGFGVDGLQVEELYSLDDDK-AMTRPTYGLIFLFKWRQGDETTGI 65

  Fly    85 VTDRSDIFFARQVIPNACATQALLCLLLNLQHEDIDLGQTLTDLRNLCQDLDPECRGHRLANEEK 149
            .:|:.:||||.|.|.||||||||:.||:|::..|:.||..|...:....||||..|||.|:|.|:
 Worm    66 PSDKQNIFFAHQTIQNACATQALINLLMNVEDTDVKLGNILNQYKEFAIDLDPNTRGHCLSNSEE 130

  Fly   150 IRKVHNSFARPELFVVEESTDFIEDDCYHFVGFMPIKGKLFELDGMHEGPIELADIDQQQNWLDV 214
            ||.|||||:|..||.::......||: ||||.::||..|::||||:.|.|:|:|:..::|:|::.
 Worm   131 IRTVHNSFSRQTLFELDIKGGESEDN-YHFVTYVPIGNKVYELDGLRELPLEVAEFQKEQDWIEA 194

  Fly   215 VRPIIEARMERYSVGEIHFNLMALVSDRQRCYERKIQ-MLVNLPSQLSHADRQAEIANLRSHVRH 278
            ::|:|:.||::||.|||.|||||||.:|    ::|:| |:.||.....:.:.:.:||:|...:..
 Worm   195 IKPVIQQRMQKYSEGEITFNLMALVPNR----KQKLQEMMENLIQANENNELEEQIADLNKAIAD 255

  Fly   279 EKEKKRRYRKENIRRRHNYLPFIVELLKQLGETGQLMAICDK----AKDRSYL 327
            |..|...|||||.||||||.||::||:|.|.:.|:|:.:.|.    ||::|.|
 Worm   256 EDYKMEMYRKENNRRRHNYTPFVIELMKILAKEGKLVGLVDNAYQAAKEKSKL 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uch-L5RNP_572781.1 Peptidase_C12_UCH37_BAP1 25..238 CDD:187738 106/212 (50%)
ubh-4NP_001379065.1 Peptidase_C12_UCH37_BAP1 7..218 CDD:187738 106/212 (50%)
UCH_C 246..291 CDD:407868 23/44 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167045
Domainoid 1 1.000 241 1.000 Domainoid score I1247
eggNOG 1 0.900 - - E1_KOG2778
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 322 1.000 Inparanoid score I1477
Isobase 1 0.950 - 0 Normalized mean entropy S1802
OMA 1 1.010 - - QHG53985
OrthoDB 1 1.010 - - D1363547at2759
OrthoFinder 1 1.000 - - FOG0001783
OrthoInspector 1 1.000 - - otm14336
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10589
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1589
SonicParanoid 1 1.000 - - X1137
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.850

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