DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp318a1 and shd

DIOPT Version :9

Sequence 1:NP_727590.1 Gene:Cyp318a1 / 32172 FlyBaseID:FBgn0030369 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001261843.1 Gene:shd / 39592 FlyBaseID:FBgn0003388 Length:540 Species:Drosophila melanogaster


Alignment Length:494 Identity:100/494 - (20%)
Similarity:189/494 - (38%) Gaps:109/494 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 INLHPNSILEKVSQY--RVHFQRPLAVLVGTRVLLYIDDPAGMECVLNAPECLDKTFLQDGFFVR 112
            ::|:....||||.:|  :..|:.|..::|..|              .:.|:          .:..
  Fly   115 VHLYNRDDLEKVLKYPSKYPFRPPTEIIVMYR--------------QSRPD----------RYAS 155

  Fly   113 RGLLHARGQKWKLRRKQLNPAF-SHNIVASFFDVFNSVGNQMVEQFQTQTNLHGQAV-KFTAAED 175
            .|:::.:|..|:..|..|..:. |..::.:|....|:|.:..:|..:.:.:.....| .|   |:
  Fly   156 VGIVNEQGPMWQRLRSSLTSSITSPRVLQNFLPALNAVCDDFIELLRARRDPDTLVVPNF---EE 217

  Fly   176 LLSRAVLEVSCLTIMGTPTNFTQLDDAHIAHSYKRLLEISAVRVVKPWLQIRL--------LHRL 232
            |.:...||..|..::|....|..:|.       |:..:||.:......|.|..        |.:.
  Fly   218 LANLMGLEAVCTLMLGRRMGFLAIDT-------KQPQKISQLAAAVKQLFISQRDSYYGLGLWKY 275

  Fly   233 LAPELYEESKKCAKLLEDFVGGIVRTKHRNWRLRDAVGGEKSGEDASNGWQRRIFIEQIFQLAAN 297
            ...:.|.:..:...|:.|.:..|:  .|....|:.:...|   :|.:.| .|.||:..:      
  Fly   276 FPTKTYRDFARAEDLIYDVISEII--DHELEELKKSAACE---DDEAAG-LRSIFLNIL------ 328

  Fly   298 GEMTLEEIMDEAQSM---VLVSFETVSNSIMLALLCLATNKGDCQRRLLAEI-----RALVPDVG 354
             |:...:|.|:..::   :....||::|:::..|..:..:.| ...|:|:|.     ..::.|. 
  Fly   329 -ELKDLDIRDKKSAIIDFIAAGIETLANTLLFVLSSVTGDPG-AMPRILSEFCEYRDTNILQDA- 390

  Fly   355 QVGLEQLQQLRYLDAFVSESLRLLATVPMNLRHVSRDFRLAG---RQHETIVPQNSIVVLDTFNM 416
                  |....|..|.:.||.||..|.....|.:..|..|:|   .....::.||.|......|.
  Fly   391 ------LTNATYTKACIQESYRLRPTAFCLARILEEDMELSGYSLNAGTVVLCQNMIACHKDSNF 449

  Fly   417 QRDERWWGANARQFDPQRFLDQEEEQLSKGHNDSGSGEKRRQRDRRHSYSFLPFSNGLRSCIGRR 481
            |        .|:||.|:|::|...|..:...:::.              ..:||..|.|||.|:|
  Fly   450 Q--------GAKQFTPERWIDPATENFTVNVDNAS--------------IVVPFGVGRRSCPGKR 492

  Fly   482 YGLFIMKVFLVKLITNFDFQSDFELEKLQFVENISLKFK 520
            :....:.:.|.|::..||         :.||:.:..:|:
  Fly   493 FVEMEVVLLLAKMVLAFD---------VSFVKPLETEFE 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp318a1NP_727590.1 p450 42..503 CDD:299894 97/475 (20%)
shdNP_001261843.1 p450 63..528 CDD:299894 100/494 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24305
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.