DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp318a1 and Cyp4b1

DIOPT Version :9

Sequence 1:NP_727590.1 Gene:Cyp318a1 / 32172 FlyBaseID:FBgn0030369 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_058695.2 Gene:Cyp4b1 / 24307 RGDID:2480 Length:511 Species:Rattus norvegicus


Alignment Length:571 Identity:131/571 - (22%)
Similarity:220/571 - (38%) Gaps:123/571 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IALWACGALLAVL------LAWQQRKCWRLIWQLNGWRGVIQQPVLWLL-LCINLHPNSILEKVS 62
            :.|||...:|.|:      |..:::|..|.:....|      .|..||. ..:.:.....|:||.
  Rat    13 LGLWASVVILMVIVLKLFSLLLRRQKLARAMDSFPG------PPTHWLFGHALEIQKLGSLDKVV 71

  Fly    63 QYRVHFQRPLAVLVGTRV-LLYIDDPAGMECVLNA--PECLD--KTFLQDGFFVRRGLLHARGQK 122
            .:...|.....:..|..| .|.|.:|...:.|.:.  |:..|  ..|||   ::.:|||...|.|
  Rat    72 SWAQQFPHAHPLWFGQFVGFLNIYEPDYAKAVYSRGDPKAADVYDFFLQ---WIGKGLLVLDGPK 133

  Fly   123 WKLRRKQLNPAFSHNI----VASF--------------------FDVFNSVGNQMVEQFQTQTNL 163
            |...||.|.|.|.:::    ||.|                    ||:|..||:..::.....|  
  Rat   134 WFQHRKLLTPGFHYDVLKPYVAIFAESTRMMLDKWEKKASENKSFDIFCDVGHMALDTLMKCT-- 196

  Fly   164 HGQAVKFTAAEDLLSRAVLEVSCLTIMGTPTNFTQLDDAHIAHS---YKRLLEISAVRVVKPWLQ 225
            .|:........|  :...|.||.||::     ..|..|:...|:   |              |  
  Rat   197 FGKGDSGLGHRD--NSYYLAVSDLTLL-----MQQRIDSFQYHNDFIY--------------W-- 238

  Fly   226 IRLLHRLLAPELYEESKKCAKLLEDFVGGIVRTKHRNWRLRDAVGGEKSGEDASNGWQRR--IFI 288
                   |.|......:.| |:..|....::|.:      :.|:..||..:...   |||  .|:
  Rat   239 -------LTPHGRRFLRAC-KIAHDHTDEVIRQR------KAALQDEKERKKIQ---QRRHLDFL 286

  Fly   289 EQIFQLAANGEMTLE--EIMDEAQSMVLVSFETVSNSIMLALLCLATNKGDCQRRLLAEIRALVP 351
            :.:..:.....:.|.  |:..|..:.:....:|.::.|...|.|:|... :.|:....|:|.::.
  Rat   287 DILLGVRDESGIKLSDAELRAEVDTFMFEGHDTTTSGISWFLYCMALYP-EHQQLCREEVRGILG 350

  Fly   352 DVGQVGLEQLQQLRYLDAFVSESLRLLATVPMNLRHVSRDFRLA-GRQHETIVPQNSIVVLDTFN 415
            |......:.|.::.||...:.|..||...||...|.:::..... ||.    :|..|::.|..:.
  Rat   351 DQDSFQWDDLAKMTYLTMCMKECFRLYPPVPQVYRQLNKPVTFVDGRS----LPAGSLISLHIYA 411

  Fly   416 MQRDERWWGANARQFDPQRFLDQEEEQLSKGHNDSGSGEKRRQRDRRHSYSFLPFSNGLRSCIGR 480
            :.|:...| .:...|||.||..:         |.:|          ||.::|:|||.|.|:|||:
  Rat   412 LHRNSTVW-PDPEVFDPLRFSPE---------NAAG----------RHPFAFMPFSAGPRNCIGQ 456

  Fly   481 RYGLFIMKVFLVKLITNFDFQSDFELEKLQFVENISLKFKNADDILLTIQP 531
            ::.:..|||.....:..|:|..|.....:: |..:.|:.||.  |.|.::|
  Rat   457 QFAMNEMKVVTALCLLRFEFSLDPSKMPIK-VPQLILRSKNG--IHLYLKP 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp318a1NP_727590.1 p450 42..503 CDD:299894 114/498 (23%)
Cyp4b1NP_058695.2 p450 47..500 CDD:278495 121/531 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.780

Return to query results.
Submit another query.