DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp311a1 and Cyp4f40

DIOPT Version :10

Sequence 1:NP_572780.3 Gene:Cyp311a1 / 32170 FlyBaseID:FBgn0030367 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_001102830.1 Gene:Cyp4f40 / 503122 RGDID:1559596 Length:523 Species:Rattus norvegicus


Alignment Length:508 Identity:148/508 - (29%)
Similarity:234/508 - (46%) Gaps:49/508 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 WPLLLITLTIWILVRKWTLL--------RLGSSLPGP----WAFPLLGNAQMVGKLRP--EYIFL 54
            |.||.:....|.|.|..|.:        || ...|.|    |.:..||       :.|  |....
  Rat    19 WLLLSLVGVSWFLTRCLTQIYTLYAKCQRL-CGFPQPPKRSWFWGHLG-------MSPPTEEGMK 75

  Fly    55 VFTELRDRFGATYRLRLGPQL-WVFLHSAEETRQALHDPTL---RKADTFMQLEPLIGNGLLISH 115
            ..|||...:...:...|||.: .:.|...:..|..|.....   :....:..|:|.:|:|||:|.
  Rat    76 QMTELVATYPQGFMTWLGPIVPLITLCHPDIIRSVLSASAAVAPKDGIFYSFLKPWLGDGLLVSA 140

  Fly   116 GAHWTRQRRLLTPAFQPQLLRSFAPAIGG-----HVERLVGRLGATRGAFLEVTEPLFACLLDAI 175
            ...|:|.|.:|||||...:|:.:......     |.:.|  ||.:...|.|::.|.:....||.:
  Rat   141 SDKWSRHRSMLTPAFHFNILKPYVKIFNDSTNIMHAKWL--RLASGGSAHLDMFENISLMTLDTL 203

  Fly   176 VDTSMGAQLDTQSVDHSPIIQAFHLSSKLLFKRMINPLLSSDWIFQRTQLWRDLDEQLQVIHSQM 240
            .........:.|......|.....||: |:.||....||..|.:::.|...|...:...::|...
  Rat   204 QKCVFSFNSNCQEKPSEYIAAILELSA-LVVKRNEQLLLHMDLLYRLTPDGRRFYKACHLVHDFT 267

  Fly   241 ESVIEKRAKELLDMG-------EPAGRAHNLLDTLLLAKFE-GQSLSRREIRDEINTFVFAGVDT 297
            .:||::|.:.|...|       :...:..:.:|.|||:|.| |:.||..:||.|.:||:|.|.||
  Rat   268 YAVIQERRRTLPKHGGDDVIKAKAKSKTLDFIDVLLLSKDEDGKELSDEDIRAEADTFMFEGHDT 332

  Fly   298 TTAAMSFVLYALAKFPETQTRLRKELQDVALD---ETTDLDALNGLPYLEALIKEVLRLYTIVPT 359
            |.:.:|::||.|||.||.|.|.|:|:|::..|   |..:.|.|..||:|...|||.|||:..|..
  Rat   333 TASGLSWILYNLAKHPEYQERCRQEVQELLRDRDSEEIEWDDLAQLPFLTMCIKESLRLHPPVTM 397

  Fly   360 TGRQTTQSTEI-GGRTYCAGVTLWINMYGLAHDKEYYPDPYAFKPERWLPEDGAVAPPAFSYIPF 423
            ..|..||...: .||....|:...||::...|:...:.||..:.|.|:.||:.....| .::|||
  Rat   398 VSRCCTQDISLPDGRVIPKGIICIINIFATHHNPTVWQDPEVYDPFRFDPENIQARSP-LAFIPF 461

  Fly   424 SGGPHVCIGRRYSLLLMKLLTARLVREFQMELSPEQAPLRLEAQMVLKAQQGI 476
            |.||..|||:.:::..||:..|..:..|:  :.|:....|.:.:::|:|:.|:
  Rat   462 SAGPRNCIGQTFAMNEMKVAVALTLLRFR--VLPDDKEPRRKPELILRAEDGL 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp311a1NP_572780.3 cytochrome_P450 64..478 CDD:477761 129/434 (30%)
Cyp4f40NP_001102830.1 CYP4F 74..515 CDD:410772 132/445 (30%)

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