DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp311a1 and Cyp26b1

DIOPT Version :9

Sequence 1:NP_572780.3 Gene:Cyp311a1 / 32170 FlyBaseID:FBgn0030367 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_001171184.1 Gene:Cyp26b1 / 232174 MGIID:2176159 Length:512 Species:Mus musculus


Alignment Length:522 Identity:127/522 - (24%)
Similarity:208/522 - (39%) Gaps:103/522 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLLITLTIWILVRKWTLLRLGS-SLP---GPWAFPLLGNA-----QMVGKLRPEYIFLVFTELRD 61
            ||.::..:|.|  :|...|..| .||   |...|||:|..     |..|         ..:..|:
Mouse    25 LLAVSQQLWQL--RWAATRDKSCKLPIPKGSMGFPLIGETGHWLLQGSG---------FQSSRRE 78

  Fly    62 RFGATYRLRLGPQLWVFLHSAEETRQ-ALHDPTLRKADTFMQLEPLIG-NGLLISHGAHWTRQRR 124
            ::|..::..|..:..:.:..||..|: .|.:..|...:.......|:| |.:..|.|.....:|:
Mouse    79 KYGNVFKTHLLGRPLIRVTGAENVRKILLGEHQLVSTEWPRSARVLLGPNTVANSIGDIHRNKRK 143

  Fly   125 LLTPAFQPQLLRSFAPAIGGHVERLVGRLGATRGAFLEVTEPLFACLLDAIVDTSMGAQLDTQSV 189
            :.:..|..:.|.|:.|.|     :||                        |.||........:: 
Mouse   144 VFSKIFSHEALESYLPKI-----QLV------------------------IQDTLRAWSSQPEA- 178

  Fly   190 DHSPIIQAFHLSSKLLFKRMINPLLSSDWIFQRTQLWRDLDEQLQVIHSQMESVIEK-------- 246
                 |..:..:.:|.|:..:..||.    |...:  .||....:|....:|:|...        
Mouse   179 -----INVYQEAQRLTFRMAVRVLLG----FSIPE--EDLGHLFEVYQQFVENVFSLPVDLPFSG 232

  Fly   247 -----RAKELLDMG-EPAGRA----------HNLLDTLL-LAKFEGQSLSRREIRDEINTFVFAG 294
                 :|:::|..| |.|.|.          .:.||.|: .:|..|:.::.:|::|.....:||.
Mouse   233 YRRGIQARQILQKGLEKAIREKLQCTQGKDYSDALDILIESSKEHGKEMTMQELKDGTLELIFAA 297

  Fly   295 VDTTTAAMSFVLYALAKFPETQTRLRKELQDVAL--------DETTDLDALNGLPYLEALIKEVL 351
            ..||.:|.:.::..|.|.|....:||:||:...|        :.|..||.|:.|.||:.:||||:
Mouse   298 YATTASASTSLIMQLLKHPAVLEKLREELRAQGLLHGGGCPCEGTLRLDTLSSLRYLDCVIKEVM 362

  Fly   352 RLYTIVPTTGRQTTQSTEIGGRTYCAGVTLWINMYGL--AHD-KEYYPDPYAFKPERWLPEDGAV 413
            ||:|.|....|...|:.|:.|.....|   |..||.:  .|| ...:.|...|.|:|:.......
Mouse   363 RLFTPVSGGYRTVLQTFELDGFQIPKG---WSVMYSIRDTHDTAPVFKDVNVFDPDRFSQARSED 424

  Fly   414 APPAFSYIPFSGGPHVCIGRRYSLLLMKLLTARLVREFQMELSPEQAPLRLEAQMVLKAQQGINV 478
            ....|.|:||.||...|:|:..:.|.:|:|...|....:.||:....| |:....||....|::|
Mouse   425 KDGRFHYLPFGGGVRTCLGKHLAKLFLKVLAVELASTSRFELATRTFP-RITLVPVLHPVDGLSV 488

  Fly   479 SF 480
            .|
Mouse   489 KF 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp311a1NP_572780.3 p450 30..480 CDD:278495 118/495 (24%)
Cyp26b1NP_001171184.1 CYP26B1 60..490 CDD:410730 113/483 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4824
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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