DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp311a1 and cyp-13A4

DIOPT Version :9

Sequence 1:NP_572780.3 Gene:Cyp311a1 / 32170 FlyBaseID:FBgn0030367 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_496111.1 Gene:cyp-13A4 / 188355 WormBaseID:WBGene00011671 Length:520 Species:Caenorhabditis elegans


Alignment Length:523 Identity:127/523 - (24%)
Similarity:221/523 - (42%) Gaps:106/523 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ITLTIWILVRKWTL-LRLGSSLPGPWAFPLLG------NAQMVGKLRPEYIFLVFTELRDRFGAT 66
            :|..|||    |:. :|.|  :.||..||..|      :.:..|.|:       ..|...::|:.
 Worm    16 LTYYIWI----WSFWIRKG--VKGPRGFPFFGVILKFHDYENPGLLK-------LGEWTKKYGSI 67

  Fly    67 YRLRLGPQLWVFLHSAEETRQALHDPTLRKADTF--MQLEPLIGN-------GLLISHGAHWTRQ 122
            |.:..|.:..:.:.:.|    .:|:..:::.|.|  .:..|:.|:       .|:::.|..|.|.
 Worm    68 YGITEGVEKTLVVSNPE----FVHEVFVKQFDNFYGRKTNPIQGDPNKNKRAHLVLAQGHRWKRL 128

  Fly   123 RRLLTPAFQPQLLRSFAPAIGGHVERLVGRL--GATRGAFLEVTEPLFACLLDAIVDTSMGAQLD 185
            |.|.:|.|..:.||.....:...|..|:..|  .:.:|..:::.:......||.|...:||   .
 Worm   129 RTLASPTFSNKSLRKIMSTVEETVVELMRHLDEASAKGKAVDLLDYYQEFTLDIIGRIAMG---Q 190

  Fly   186 TQSVDHSPIIQAFHLSSKLLFKRMINPLLSS-DWIFQR---------------TQLWRDLDEQ-- 232
            |:|               |:|:   ||:|.. ..||::               ..|.|.|..:  
 Worm   191 TES---------------LMFR---NPMLPKVKEIFKKGGKMPFLIAGVFPIAGTLMRQLFMKFP 237

  Fly   233 --------LQVIHSQMESVIEKRAKELLDMGEPAGRAHNLLD----------------TLLLAKF 273
                    :..:...:...:|:||.:.....||:|...:.:|                ||..||.
 Worm   238 KFSPAFGIMNTMEKALNKRLEQRAADKKAGIEPSGEPQDFIDLFLDARANVDFIEEESTLGFAKS 302

  Fly   274 E----GQSLSRREIRDEINTFVFAGVDTTTAAMSFVLYALAKFPETQTRLRKELQDVALDETTDL 334
            |    .:.|:..||..::..|:.||.|||..::|:..|.||..||.|.:|::|:.....|.....
 Worm   303 EVLKVDKHLTFDEIIGQLFVFLLAGYDTTALSLSYSSYLLATHPEIQKKLQEEVDRECPDPEVTF 367

  Fly   335 DALNGLPYLEALIKEVLRLYTIVPTT-GRQTTQSTEIGGRTYCAGVTLWINMYGLAHD-KEYYPD 397
            |.::.|.|:|.::||.||:|.:.... .|:..:.|.:.|.....|..:.::.:.|.:| |.:..|
 Worm   368 DQISKLKYMECVVKEALRMYPLASLVHNRKCMKKTNVLGVEIDEGTNVQVDTWTLHYDPKVWGDD 432

  Fly   398 PYAFKPERWLPEDGAVAPPAFSYIPFSGGPHVCIGRRYSLLLMKLLTARLVREFQMELSPE-QAP 461
            ...||||||...|....... .|:||..||.:|||.|.:::..|||...:::::..:.|.| :.|
 Worm   433 ASEFKPERWETGDELFYAKG-GYLPFGMGPRICIGMRLAMMEEKLLLTHILKKYTFDTSTETEIP 496

  Fly   462 LRL 464
            |:|
 Worm   497 LKL 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp311a1NP_572780.3 p450 30..480 CDD:278495 120/501 (24%)
cyp-13A4NP_496111.1 p450 33..514 CDD:278495 120/500 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D786853at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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