DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp7 and faf

DIOPT Version :10

Sequence 1:NP_572779.2 Gene:Usp7 / 32169 FlyBaseID:FBgn0030366 Length:1129 Species:Drosophila melanogaster
Sequence 2:NP_524612.2 Gene:faf / 43749 FlyBaseID:FBgn0005632 Length:2778 Species:Drosophila melanogaster


Alignment Length:1066 Identity:224/1066 - (21%)
Similarity:362/1066 - (33%) Gaps:384/1066 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 WD------SKKHTGYVGLKNQGATCYMNSLLQTLYFTNSLRLSVYR----IPTEADD-------- 278
            ||      ::...|:.||||.||||||||:||.||...::|:.:.|    ..|:.:|        
  Fly  1653 WDYLPPVGARPTKGFCGLKNAGATCYMNSVLQQLYMVPAVRVGILRAHGAATTDGEDFSGDSDLT 1717

  Fly   279 -----------------SSKSVGLSLQRVFHELQFGDRPVGTKKLTKSFG--------------- 311
                             |..|...:::...|:::.....|..|.:...|.               
  Fly  1718 GGGLGSALFSGPASALVSLPSSSSTIEDGLHDVRKNYHVVILKHVQAIFAHLGHSALQYYVPRGL 1782

  Fly   312 W-------ETLDSFMQHDVQEFLRVLLDKLESKMKG----TILEGTIPGLFEGKMSSYIKCKNVD 365
            |       |.::...|.|..||...||:.|:..:|.    .::..|:.|.|    |....|:...
  Fly  1783 WTHFKLLGEPVNLREQQDAVEFFMSLLESLDEGLKALGQPQLMNATLGGSF----SDQKICQECP 1843

  Fly   366 YNSTRYETFYDIQLNIKDKKNIYESFQDYVAPETLEGDNKYDAGVHGLQEAS-KGVIFTSFPPVL 429
            :..::.|.|....::|::..::.||.:.||..|.|||.:.|.......:..: |.|.....||||
  Fly  1844 HRYSKEEPFSVFSVDIRNHSSLTESLEQYVKGELLEGADAYHCDKCDKKVVTVKRVCVKKLPPVL 1908

  Fly   430 HLHLMRFQYDPVTDSSIKYNDRFEFYEHINLDRY----LAESENTLAD-------------YVLH 477
            .:.|.||:||.....:||:||.|||...::::.|    ||:.|..:.:             |.|.
  Fly  1909 AIQLKRFEYDYERVCAIKFNDYFEFPRILDMEPYTVSGLAKLEGEVVEVGDNCQTNVETTKYELT 1973

  Fly   478 AVLVHSGDNHGGHYVVFI---NPKADGR--WFKFDDDVVSSCRKQEAIEQN---YGG--MDDEIS 532
            .::||||...||||..:|   || |:|:  |:||||..|:.|:..|..|..   :||  |.:...
  Fly  1974 GIVVHSGQASGGHYFSYILSKNP-ANGKCQWYKFDDGEVTECKMHEDEEMKAECFGGEYMGETYD 2037

  Fly   533 FHAKCS---------NAYMLVYIRQSELDRVLGDITESEISSDLVERLDL-EKR---IEMARRKE 584
            .:.|..         |||||.|.|..:..      .:.|.|   ||:|.| |.|   :.:.:..|
  Fly  2038 NNLKRMQYRRQKRWWNAYMLFYTRCDQTP------VQYEPS---VEQLSLAESRNMVLPLPKPIE 2093

  Fly   585 RGEANTYVSVHVILEENFEEQHKRRLFDLE-------------------KVHPRV---------- 620
            |.          :..:|....|.|.:|.:|                   |:.|..          
  Fly  2094 RS----------VRHQNIRFLHSRSIFSVEFFNFIKKLVSCNLLSARSNKITPAAEELSLLGVQL 2148

  Fly   621 ---------FRIKQN-------------------------------------------------- 626
                     ||.|::                                                  
  Fly  2149 ASQFLFHTGFRTKKSLRGPVMEWYDALSHHIRSSALVRKWFANHALLSPPSRLGEYILMAPSPDV 2213

  Fly   627 QTVDELVDLFVRGFGVSRQRMRMW---NLC--------------TAQTQK-----FSHFD-FVAE 668
            :||...:.:|...|.::.:.:..:   |||              .|...|     ||.|. :|..
  Fly  2214 RTVFVKLVVFFCHFAINDEPLTGYDGANLCEQVLISVLRLLKSEAADYGKHLPHYFSLFSMYVGL 2278

  Fly   669 GSRTIEQISTSQKPWVIWLQLAWTDVPGPLPPFNPKTESLLFLKYYDPRNKRLNYIGCTQQPHTR 733
            |:|..:|:.....| :.::|:|..|.|||.            :||..|...:|:.:    ..|..
  Fly  2279 GTREKQQLLRLNVP-LQFIQVALDDGPGPA------------IKYQYPEFSKLHQV----VSHLI 2326

  Fly   734 RLIDLVPDVNSKLGFEPDTELTIYDEYAD-----KKLVNLNEPIESALFIPQDHLQGHI-LIFER 792
            |    ..||:.|..........:.:.:.|     ::|..|:......||    :..|:| .:.|.
  Fly  2327 R----CSDVSEKCQSSNQNARPLSNPFKDPNVAHEELTPLSTECMDLLF----NRTGYIKKVIED 2383

  Fly   793 ENVDAKLDLPTVGDYFLDLVYRIEIIFSDKCNPNEPDFT-------------------------- 831
            .|         |||..|.|:        ..|:...|.|:                          
  Fly  2384 TN---------VGDEGLKLL--------QYCSWENPHFSRAVLTELLWQCGFAYCHDMRHHTDLL 2431

  Fly   832 ---LELSNRYNYDQLANA---VAE----------RLNTDPQK--LQFFMCINNYKETAGNAVPYT 878
               |.:.:.:.:.::.||   |||          |..|..||  .|...|:..          ..
  Fly  2432 LNILLIDDSWQHHRIHNALNGVAEEREGLLETIQRAKTHYQKRAYQIIKCLTQ----------LF 2486

  Fly   879 FKGTIKDLVSYTKQSSTKRIFYQRLSLSIH----ELDNKKQFKCVWVSSDLKDEKELVLYPNKND 939
            .|..|...:.:|..:.|:     ..|:::.    |||.::...|.:.|.......:      .||
  Fly  2487 HKSPIALQMLHTNSNITR-----HWSIAVEWLQGELDRQRGIGCQYNSYSWSPPAQ------SND 2540

  Fly   940 TVKGLLEEAAKKISFAENSRRKLRLLKISNHKIVAVCKDDIP----------LDTLLKSNESITT 994
            ...|.:.|.::.   |:|:.          .....:|.|::.          |:|.:..|:|...
  Fly  2541 NTNGYMLERSQS---AKNTW----------SMAFELCPDEVSEKTDENNEPNLETNMDENKSEPV 2592

  Fly   995 AQ--GAQKTFRIEEVPAEDMQLAENE 1018
            ||  |.     :|.......||.||:
  Fly  2593 AQPGGV-----LEGSTGGTEQLPENK 2613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp7NP_572779.2 Peptidase_C19 101..1119 CDD:470612 224/1066 (21%)
fafNP_524612.2 Ubl1_cv_Nsp3_N-like <994..1060 CDD:475130
peptidase_C19C 1666..2064 CDD:239124 111/402 (28%)
DUF3517 2198..2566 CDD:463438 78/443 (18%)
Blue background indicates that the domain is not in the aligned region.

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