DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp7 and usp40

DIOPT Version :9

Sequence 1:NP_572779.2 Gene:Usp7 / 32169 FlyBaseID:FBgn0030366 Length:1129 Species:Drosophila melanogaster
Sequence 2:XP_001921353.3 Gene:usp40 / 402834 ZFINID:ZDB-GENE-060518-5 Length:1263 Species:Danio rerio


Alignment Length:413 Identity:115/413 - (27%)
Similarity:173/413 - (41%) Gaps:61/413 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 GLKNQGATCYMNSLLQTLYFTNSLRLSVYRI-PTE----ADDSS-----KSVGLSLQRVF-HELQ 295
            |:||||.|||:|||:|||.||...|..::.: |.|    ||...     :.:.|.|||:| |.|.
Zfish    39 GIKNQGGTCYLNSLIQTLLFTPEFREELFHLGPDELGCLADKDKPEAKVRVIPLELQRLFSHLLL 103

  Fly   296 FGDRPVGTKKLTKSFGWETLDSFMQHDVQEFLRVLLDKLESKMKGTILEGTIPGLFEGKMSSYIK 360
            ..::...|..||.||||...:...|.||||..|:|...|||.:..|.....|..|:.|.:.:.|.
Zfish   104 VDEQTASTTDLTDSFGWTNNEEMGQQDVQELNRILFSALESSLVDTSGSSLIHRLYHGTLVNQIT 168

  Fly   361 CKNVDYNSTRYETFYDIQLNIKDKKNIYESFQD-YVAPETLEGDNKYD-AGVHGLQEASKGVIFT 423
            ||...|.|.|.|.|.|:.:::.....:.|:..: :|..|..||:|.|. :|...|..|:|.....
Zfish   169 CKECSYISERQEDFLDLTVSVSGVSGLEEALWNMFVEEEMFEGNNLYRCSGCGQLVRAAKSAKLR 233

  Fly   424 SFPPVLHLHLMRFQYDPVTDSSIKYNDRFEFYEHINLDRYLAESE--NTLADYVLHAVLVHSGDN 486
            ..||.|.:.|:||.:|.......|....:.|....||..:..:|.  ::...|.|.:|::|.|..
Zfish   234 KLPPFLTISLLRFNFDFTKCERYKETGSYVFPLTFNLRPFCEQSNWPDSEYSYELFSVIIHKGGC 298

  Fly   487 HGGHYVVFINPKAD-GRWFKFDDDVVSSCRKQEAIEQNYGGMDDEISFHAKCSNAYMLVYIRQSE 550
            :||||.|:|..... |.|              ||.|:     :..:....|..........|::|
Zfish   299 YGGHYHVYIKDIDQLGHW--------------EAPEE-----EKNVKMKVKTQKQENKTEERKTE 344

  Fly   551 LDRVL----------GDITESEISSDLVERLDLEKRIEMARRKERGEANTYVSVHVILEENFEEQ 605
            .:..|          |.:.:.|....||::|..:...::.....:.....|.|:...|:.     
Zfish   345 SENSLETEDPLSVLTGILAQEESKCVLVDQLGQKLLNKIGTPWSKKYKKQYGSISKFLQS----- 404

  Fly   606 HKRRLFDLEKVHPRVFRIKQNQT 628
                       ||.||.:..|.|
Zfish   405 -----------HPEVFMLISNGT 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp7NP_572779.2 MATH_HAUSP 100..229 CDD:239741
COG5077 101..1119 CDD:227409 115/413 (28%)
peptidase_C19C 239..549 CDD:239124 99/322 (31%)
USP7_ICP0_bdg 647..886 CDD:289221
USP7_C2 897..1113 CDD:291217
usp40XP_001921353.3 Peptidase_C19 37..316 CDD:271592 93/276 (34%)
UCH_1 39..308 CDD:290159 91/268 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5077
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D77113at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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