DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp7 and Usp40

DIOPT Version :9

Sequence 1:NP_572779.2 Gene:Usp7 / 32169 FlyBaseID:FBgn0030366 Length:1129 Species:Drosophila melanogaster
Sequence 2:NP_001128357.1 Gene:Usp40 / 316599 RGDID:1309613 Length:1235 Species:Rattus norvegicus


Alignment Length:896 Identity:205/896 - (22%)
Similarity:343/896 - (38%) Gaps:234/896 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 KKHTGYVGLKNQGATCYMNSLLQTLYFTNSLRLSVYRIPTE----ADDSSKS------VGLSLQR 289
            ::.|...|::|||.|||::||||||:||...|.:::.:..|    .:|..|.      :.|.|||
  Rat    35 REFTKLSGIRNQGGTCYLSSLLQTLHFTPEFREALFSLGPEELGSLEDKDKPEAKVRIIPLQLQR 99

  Fly   290 VFHELQFGDR-PVGTKKLTKSFGWETLDSFMQHDVQEFLRVLLDKLESKMKGTILEGTIPGLFEG 353
            :|.:|...|: ...|..||.||||.:.:...||||||..|:|...||:.:.||.....|..|:.|
  Rat   100 LFAQLLLVDQEAASTTDLTDSFGWTSDEEMRQHDVQELNRILFSALETSLVGTSGHDLIHRLYHG 164

  Fly   354 KMSSYIKCKNVDYNSTRYETFYDIQLNIKDKKNIYESFQD-YVAPETLEGDNKYDAGV-HGLQEA 416
            .:.:.|.||.....|.|.|.|.|:.:.:|:...:.::..: ||..|..:.||.|..|. ..|.:|
  Rat   165 TIVNQIVCKECKNVSERQEDFLDLTVAVKNVSGLEDALWNMYVEEEIFDYDNLYHCGTCDRLVKA 229

  Fly   417 SKGVIFTSFPPVLHLHLMRFQYDPVTDSSIKYNDRFEFYEHINLDRYLAESENTLADYV--LHAV 479
            :|.......||.|.:.|:||.:|.|.....|....:.|...|||..:..:|:....:|:  |.:|
  Rat   230 AKSAKLRKLPPFLTISLLRFNFDFVKCERYKDTSCYTFPLRINLKPFCEQSDMDDMEYMYDLFSV 294

  Fly   480 LVHSGDNHGGHYVVFINPKAD--GRWFKFDDDVVSSCRKQEAIEQNYGGMDDEISFHAKCSNAYM 542
            ::|.|..:||||.|:|. ..|  |.| :..:::..|....:| .||....||.:        ..:
  Rat   295 IIHKGGCYGGHYHVYIK-DVDHLGNW-QCQEEISDSAVNLKA-PQNEEETDDPL--------VVL 348

  Fly   543 LVYIRQSELDRVLGDITESEISSDLVERLDLEKRIEMAR--RKERGEANTYVSVHVILEENFEEQ 605
            ...:.|.|.:::..|        .|.::|.::..|...:  ||:.|....::             
  Rat   349 KAILLQEEANQIPVD--------QLGQKLLIKTGISWNKKYRKQHGPLRKFL------------- 392

  Fly   606 HKRRLFDLEKVHPRVFRIKQNQTVDELVDLFVRGFGVSRQRMRMWNLCTAQTQKFSHFDFVAEGS 670
                     ::||:||.:..:::.            ||.||              |||..|....
  Rat   393 ---------RLHPQVFLLSTDEST------------VSLQR--------------SHFPQVPSDP 422

  Fly   671 RTIEQI--STSQKPWVIWLQLA---WTDV-PGPLPPFNPK--------TES--LLF--------- 710
            ::.|||  :.:.:|..:...::   |.|: ...:.|...|        .||  :||         
  Rat   423 QSHEQIAHTLASEPPGLRDNISCPHWFDINDSKVQPIKEKDIMQQFQGKESAYMLFYRKATLQRP 487

  Fly   711 ---------------LKYYDPRNKRLN-----------------YIGCTQQPHTRRLID-LVPDV 742
                           ||..|..|..|.                 ::|    ||.|.... |.|.|
  Rat   488 SEAQANPRYRVPCHLLKEMDAANVLLQTRRAECDSANSTFELHLHLG----PHYRFFNGALHPAV 548

  Fly   743 NSKLGFEPDTELTIYDEYADK-KLVNLNEPIESALFIPQDHLQGHILIFERENVDAKL------- 799
            :       .|| :::|...|| |.|.   .:..::|...:..:|.:::...:.|.|.|       
  Rat   549 S-------QTE-SVWDLTFDKRKTVG---DLRQSIFQLLEFWEGDMVLSVAKRVPAGLHVYHTLD 602

  Fly   800 -DLPTVGDYFL----DL-------VYRIEIIFSDKCNPNEPDFT-LELSNRYNYDQLANAVAERL 851
             |..|:|:..:    |:       |..::|.....|.|...... ||||..       .:..|:|
  Rat   603 GDELTLGEAEIADEEDIFVWNGVEVGGVQIQTGFDCEPLLLHILHLELSGE-------GSECEQL 660

  Fly   852 NTDPQKLQFFMCINNYKETAGNAVPYTFKGTIKDLVSYTKQSSTKRIFYQRLSLSIHELDNKKQF 916
            ...|         :.:...|.....:|..||.:.::......||.    :....:|.:.|.||.|
  Rat   661 VESP---------HVFPANAEVGTVFTALGTPEGVLLMNSVESTD----EECWTAIPQEDMKKTF 712

  Fly   917 KCVWVSSDLKDEKELVLYPNKNDTVKGLLEEAAKKISFAENSRRKLRLLKISN---------HKI 972
            :    ...|:: ..|:|..:.:.....||.:..:..|    |..:|..|::.|         ...
  Rat   713 R----EQGLRN-GSLILVQDSDSDDNSLLSKQGRWTS----SMNELNWLQVKNFCQSGSEEKQVQ 768

  Fly   973 VAVCKDDIPLDTLLKSNESITTAQGAQKTFRIEEVPAEDMQLAENEFLIPV 1023
            :||....:..|..:|:.:.:...:                :||||..|.|:
  Rat   769 IAVTMHTVVFDIRIKAIKELKLMK----------------ELAENSCLRPI 803

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp7NP_572779.2 MATH_HAUSP 100..229 CDD:239741
COG5077 101..1119 CDD:227409 205/896 (23%)
peptidase_C19C 239..549 CDD:239124 101/326 (31%)
USP7_ICP0_bdg 647..886 CDD:289221 59/317 (19%)
USP7_C2 897..1113 CDD:291217 25/136 (18%)
Usp40NP_001128357.1 peptidase_C19C 40..381 CDD:239124 107/359 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5077
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D77113at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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