DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp7 and Usp28

DIOPT Version :10

Sequence 1:NP_572779.2 Gene:Usp7 / 32169 FlyBaseID:FBgn0030366 Length:1129 Species:Drosophila melanogaster
Sequence 2:NP_001423433.1 Gene:Usp28 / 315639 RGDID:1311555 Length:1143 Species:Rattus norvegicus


Alignment Length:598 Identity:116/598 - (19%)
Similarity:173/598 - (28%) Gaps:270/598 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 VGLKNQGATCYMNSLLQTLYFTNSLRLSV--YRIPTEADDSSKS--------VGLSLQRVFHELQ 295
            |||||.|.||:.::::|:|:.....|..|  |.:|....::.:|        ....||.:|..|.
  Rat   162 VGLKNVGNTCWFSAVIQSLFQLPEFRRLVLSYSLPQNILENCRSHTEKRNIMFMQELQYLFALLL 226

  Fly   296 FGDR----PVGTKKLTKSFGWETLDSFMQHDVQEFLRVLLDKLESKMK----------------- 339
            ..:|    |.....|.|  |........|.||.||...|||.||...:                 
  Rat   227 GSNRKFVDPSAALDLLK--GAFRSSEEQQQDVSEFTHKLLDWLEDAFQLAVNVNSNPRTKSENPM 289

  Fly   340 -----GTILEGTIPGLFEGKMSSYIKCKNVDYNSTRYETF--YDIQLNIKDKKNIYESFQDYVAP 397
                 ||.|   ..|:.|||..    |.|        |||  |.:|:      |.|.:..:.:..
  Rat   290 VQLFYGTFL---TEGVREGKPF----CNN--------ETFGQYPLQV------NGYHNLDECLEG 333

  Fly   398 ETLEGDNKY---DAGVHGLQEASKGVIFTSFPPVLHLHLMRFQYDPVTDSSIKYNDRFEFYEHIN 459
            ..:|||...   |..|...||.    .||..||||...|.||:::.......|.:::.||.:.|.
  Rat   334 AMVEGDIALLPSDRSVKYGQER----WFTKLPPVLTFELSRFEFNQSLGQPEKIHNKLEFPQVIY 394

  Fly   460 LDRYLAESE-------------------------------------------------------- 468
            :|||:.:|:                                                        
  Rat   395 MDRYMYKSKELIRSKRESIRKLKEEIQVLQQKLERYVKYGSGPSRFPLPDMLKYVIEFASTKPAS 459

  Fly   469 ----------------------------------------------------------------- 468
                                                                             
  Rat   460 ESCLSGSVEHMTLPLPSVHCPISDLTAKESSSPKSCSQNAEGSFSSPEDALPNSEVMNGPFTSPH 524

  Fly   469 ------------NTLAD------------------------------------------------ 473
                        .|:.|                                                
  Rat   525 SSLEMPAPPPAPRTVTDEEMNFVKTCLQRWRSEIEQDIQDLKNCISSTTQAIEQMYCDPLLRQVP 589

  Fly   474 YVLHAVLVHSGDNHGGHYVVFINPKADGRWFKFDDDVVSSCRKQEAIEQNYGGMDDEISFHAKCS 538
            |.|||||||.|....|||..:|..:....|.|::|..|:....:|....:|||:        :..
  Rat   590 YRLHAVLVHEGQASAGHYWAYIYNQPRQIWLKYNDISVTESSWEELERDSYGGL--------RNV 646

  Fly   539 NAYMLVYIRQSELDRVLGDIT--ESEISSDLVERLDLEKRIEMARRKERGEANTYVSVHVILEEN 601
            :||.|:|| ..:|.....:..  ||:.::: ||.|.:|.|..:.....|.|...         |.
  Rat   647 SAYCLMYI-NDKLPHCSAEAAHGESDQTAE-VEALSVELRQYIQEDNWRFEQEV---------EE 700

  Fly   602 FEEQHKRRLFDLE 614
            :||:...::..:|
  Rat   701 WEEEQSCKIPQME 713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp7NP_572779.2 Peptidase_C19 101..1119 CDD:470612 116/598 (19%)
Usp28NP_001423433.1 UBA_UBP28 23..64 CDD:270540
Peptidase_C19I 163..654 CDD:239130 99/525 (19%)
Peptidase_C19 163..>271 CDD:470612 33/109 (30%)
USP28_C 864..1143 CDD:380452
Blue background indicates that the domain is not in the aligned region.

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