DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp7 and Usp24

DIOPT Version :9

Sequence 1:NP_572779.2 Gene:Usp7 / 32169 FlyBaseID:FBgn0030366 Length:1129 Species:Drosophila melanogaster
Sequence 2:NP_001258135.1 Gene:Usp24 / 313427 RGDID:1306799 Length:2617 Species:Rattus norvegicus


Alignment Length:986 Identity:218/986 - (22%)
Similarity:348/986 - (35%) Gaps:309/986 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 DSKKHTGYVGLKNQGATCYMNSLLQTLYFTNSLRLSVYRIPTEADDSSKSVGLSLQRVFHELQFG 297
            ||:..:|:|||:|.|||||||::.|.||....|..|:..:..:.|:...||...:|.:|..|...
  Rat  1678 DSRSISGFVGLRNGGATCYMNAVFQQLYMQPGLPESLLSVDDDTDNPDDSVFYQVQSLFGHLMES 1742

  Fly   298 DR----PVGTKKLTKSFGWETLDSFMQHDVQEFLRVLLDKLESKMKGTILEGTIPGLFEGKMSSY 358
            ..    |....|:.|.:..| |....|.|..||...|:|:::..:|....|......|:|..|..
  Rat  1743 KLQYYVPENFWKIFKMWNKE-LYVREQQDAYEFFTSLIDQMDEYLKKMGREQIFKNTFQGIYSDQ 1806

  Fly   359 IKCKNVDYNSTRYETFYDIQLNIKDKKNIYESFQDYVAPETLEGDNKYDAGVHGLQE---ASKGV 420
            ..||:..:...|.|.|..:.|.:...:::..|...:|..|.|||.|.|..  ...:|   ..|..
  Rat  1807 KICKDCPHRYEREEAFMALNLGVTSCQSLEISLDQFVRGEVLEGSNAYYC--EKCKEKRITVKRT 1869

  Fly   421 IFTSFPPVLHLHLMRFQYDPVTDSSIKYNDRFEFYEHINLDRY---------------------- 463
            ...|.|.||.:|||||.:|..:..||||:::..|...:|::.|                      
  Rat  1870 CIKSLPSVLVIHLMRFGFDWESGRSIKYDEQIRFPWMLNMEPYTVAGMARQDSSSEVGENGRNMD 1934

  Fly   464 ----------LAESENTLADYVLHAVLVHSGDNHGGHYVVFINPK---ADGRWFKFDDDVVSSC- 514
                      :|.:||    |.|..|:||||..|.|||..||..:   ..|:|:||:|.|:... 
  Rat  1935 QGGGGSPRKKVALTEN----YELVGVIVHSGQAHAGHYYSFIKDRRGCGKGKWYKFNDTVIEEFD 1995

  Fly   515 RKQEAIE-QNYGG-----MDDEIS----FHAKCSNAYMLVY-------------------IRQSE 550
            ...|.:| :.:||     :.|:.:    ...:..|||||.|                   :||..
  Rat  1996 LNDETLEYECFGGEYRPKVYDQTNPYPDVRRRYWNAYMLFYQRVSDQNSPVLPKKSRVSVVRQEA 2060

  Fly   551 LDRVLGDITESEISSDLV--------ERLD-LEKRIEMARRK----ERGEANTYVSVHVILEENF 602
            .|..|...:..|||....        :||. |.|.::...:|    |:..|..|   .::.:||.
  Rat  2061 EDLSLSAPSSPEISPQSSPRPHRPNNDRLSILTKLVKKGEKKGLFVEKMPARIY---QMVRDENL 2122

  Fly   603 EEQHKRRLFDLEKV---------------HPR-------------------VFRIKQNQTVDE-- 631
            :....|.::..:..               ||.                   ..|.|:...||.  
  Rat  2123 KFMKNRDVYSSDYFSFVLSLASLNATKLKHPHYPCMAKVSLQLAVQFLFQTYLRTKKKLRVDTEE 2187

  Fly   632 ------------------LVDLFVRGFGVSRQRMRMWNL-CTAQTQKFS-------HFD---FVA 667
                              ||:.|:...|  |:.::::.| |:.:..:.:       ..|   |..
  Rat  2188 WIATIEALLSKSLDACQWLVEYFISSEG--RELVKVFLLECSVREVRVAVATILEKTLDSALFYQ 2250

  Fly   668 EGSRTIEQISTSQKPWVIWLQLAWTDVPGP-------LPPFNPKTESL------LFLKYYDPRNK 719
            :..:::.|:..      :.|.|...|||..       ...||...:..      |.|::...|:.
  Rat  2251 DKLKSLHQLLE------VLLALLDKDVPENCKNCAQYFSLFNTFVQKQGIRAGDLLLRHSALRHM 2309

  Fly   720 RLNYIGCTQQ------------------PHTRRLIDLVPDVNSKLGFEPDTELTIYDEYADKKLV 766
            ....:|.:||                  .:|..|:.|..||:|:....|.             :.
  Rat  2310 ISFLLGVSQQNSQIRRWSSAQAREFGNLHNTVALLVLHTDVSSQRNVAPG-------------IF 2361

  Fly   767 NLNEPIESALFIPQDHLQGHILIFERENVDAKLDLPTVGDYFLDLVYRIE------------IIF 819
            ....||..|...|        |:...|.|:|.|.|.....|.|::::.:.            :::
  Rat  2362 KQRPPISVAPSSP--------LLPLHEEVEALLFLSEGKPYLLEVMFALRELTGSLLALMEMVVY 2418

  Fly   820 SDKCNPNEPDFTLELSNRYNYDQLANAVAERLNTDPQKLQFFMCINNYKETAGNAVPYTFKGT-- 882
            ...||.:. .||:                         |.|   |.|..||   |.|:..|.|  
  Rat  2419 CCFCNEHF-SFTM-------------------------LHF---IKNQLET---APPHELKNTFQ 2451

  Fly   883 -------IKDLVSYTKQSSTKRIFYQR---LSLSIH--ELDNKKQFKCVWVSSDLKDEKELVLYP 935
                   ::|.:...:   .|.:|...   |:|..|  .:|:.:.::||         |.||...
  Rat  2452 LLHEILVMEDPIQVER---VKFVFETENGLLALMHHSNHVDSSRCYQCV---------KFLVTLA 2504

  Fly   936 NKNDTVKGLLEEAAKKISFAENSRRKLRLLKISNHKIVAVCKDDIPLDTLLKSNESITTAQGAQK 1000
            .|....|...:|.:...|:|....:|    |:|.|....            :||.|..|:.|  |
  Rat  2505 QKCPAAKEYFKENSHHWSWAVQWLQK----KMSEHYWTP------------QSNVSNETSTG--K 2551

  Fly  1001 TFRIEEVPAED 1011
            ||: ..:.|:|
  Rat  2552 TFQ-RTISAQD 2561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp7NP_572779.2 MATH_HAUSP 100..229 CDD:239741
COG5077 101..1119 CDD:227409 218/986 (22%)
peptidase_C19C 239..549 CDD:239124 106/381 (28%)
USP7_ICP0_bdg 647..886 CDD:289221 51/301 (17%)
USP7_C2 897..1113 CDD:291217 29/120 (24%)
Usp24NP_001258135.1 UBA_UBP24 6..42 CDD:270472
peptidase_C19C 1684..2041 CDD:239124 105/363 (29%)
UCH 1686..2036 CDD:278850 103/356 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5077
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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