DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp7 and Usp24

DIOPT Version :10

Sequence 1:NP_572779.2 Gene:Usp7 / 32169 FlyBaseID:FBgn0030366 Length:1129 Species:Drosophila melanogaster
Sequence 2:NP_001258135.1 Gene:Usp24 / 313427 RGDID:1306799 Length:2617 Species:Rattus norvegicus


Alignment Length:986 Identity:218/986 - (22%)
Similarity:348/986 - (35%) Gaps:309/986 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 DSKKHTGYVGLKNQGATCYMNSLLQTLYFTNSLRLSVYRIPTEADDSSKSVGLSLQRVFHELQFG 297
            ||:..:|:|||:|.|||||||::.|.||....|..|:..:..:.|:...||...:|.:|..|...
  Rat  1678 DSRSISGFVGLRNGGATCYMNAVFQQLYMQPGLPESLLSVDDDTDNPDDSVFYQVQSLFGHLMES 1742

  Fly   298 DR----PVGTKKLTKSFGWETLDSFMQHDVQEFLRVLLDKLESKMKGTILEGTIPGLFEGKMSSY 358
            ..    |....|:.|.:..| |....|.|..||...|:|:::..:|....|......|:|..|..
  Rat  1743 KLQYYVPENFWKIFKMWNKE-LYVREQQDAYEFFTSLIDQMDEYLKKMGREQIFKNTFQGIYSDQ 1806

  Fly   359 IKCKNVDYNSTRYETFYDIQLNIKDKKNIYESFQDYVAPETLEGDNKYDAGVHGLQE---ASKGV 420
            ..||:..:...|.|.|..:.|.:...:::..|...:|..|.|||.|.|..  ...:|   ..|..
  Rat  1807 KICKDCPHRYEREEAFMALNLGVTSCQSLEISLDQFVRGEVLEGSNAYYC--EKCKEKRITVKRT 1869

  Fly   421 IFTSFPPVLHLHLMRFQYDPVTDSSIKYNDRFEFYEHINLDRY---------------------- 463
            ...|.|.||.:|||||.:|..:..||||:::..|...:|::.|                      
  Rat  1870 CIKSLPSVLVIHLMRFGFDWESGRSIKYDEQIRFPWMLNMEPYTVAGMARQDSSSEVGENGRNMD 1934

  Fly   464 ----------LAESENTLADYVLHAVLVHSGDNHGGHYVVFINPK---ADGRWFKFDDDVVSSC- 514
                      :|.:||    |.|..|:||||..|.|||..||..:   ..|:|:||:|.|:... 
  Rat  1935 QGGGGSPRKKVALTEN----YELVGVIVHSGQAHAGHYYSFIKDRRGCGKGKWYKFNDTVIEEFD 1995

  Fly   515 RKQEAIE-QNYGG-----MDDEIS----FHAKCSNAYMLVY-------------------IRQSE 550
            ...|.:| :.:||     :.|:.:    ...:..|||||.|                   :||..
  Rat  1996 LNDETLEYECFGGEYRPKVYDQTNPYPDVRRRYWNAYMLFYQRVSDQNSPVLPKKSRVSVVRQEA 2060

  Fly   551 LDRVLGDITESEISSDLV--------ERLD-LEKRIEMARRK----ERGEANTYVSVHVILEENF 602
            .|..|...:..|||....        :||. |.|.::...:|    |:..|..|   .::.:||.
  Rat  2061 EDLSLSAPSSPEISPQSSPRPHRPNNDRLSILTKLVKKGEKKGLFVEKMPARIY---QMVRDENL 2122

  Fly   603 EEQHKRRLFDLEKV---------------HPR-------------------VFRIKQNQTVDE-- 631
            :....|.::..:..               ||.                   ..|.|:...||.  
  Rat  2123 KFMKNRDVYSSDYFSFVLSLASLNATKLKHPHYPCMAKVSLQLAVQFLFQTYLRTKKKLRVDTEE 2187

  Fly   632 ------------------LVDLFVRGFGVSRQRMRMWNL-CTAQTQKFS-------HFD---FVA 667
                              ||:.|:...|  |:.::::.| |:.:..:.:       ..|   |..
  Rat  2188 WIATIEALLSKSLDACQWLVEYFISSEG--RELVKVFLLECSVREVRVAVATILEKTLDSALFYQ 2250

  Fly   668 EGSRTIEQISTSQKPWVIWLQLAWTDVPGP-------LPPFNPKTESL------LFLKYYDPRNK 719
            :..:::.|:..      :.|.|...|||..       ...||...:..      |.|::...|:.
  Rat  2251 DKLKSLHQLLE------VLLALLDKDVPENCKNCAQYFSLFNTFVQKQGIRAGDLLLRHSALRHM 2309

  Fly   720 RLNYIGCTQQ------------------PHTRRLIDLVPDVNSKLGFEPDTELTIYDEYADKKLV 766
            ....:|.:||                  .:|..|:.|..||:|:....|.             :.
  Rat  2310 ISFLLGVSQQNSQIRRWSSAQAREFGNLHNTVALLVLHTDVSSQRNVAPG-------------IF 2361

  Fly   767 NLNEPIESALFIPQDHLQGHILIFERENVDAKLDLPTVGDYFLDLVYRIE------------IIF 819
            ....||..|...|        |:...|.|:|.|.|.....|.|::::.:.            :::
  Rat  2362 KQRPPISVAPSSP--------LLPLHEEVEALLFLSEGKPYLLEVMFALRELTGSLLALMEMVVY 2418

  Fly   820 SDKCNPNEPDFTLELSNRYNYDQLANAVAERLNTDPQKLQFFMCINNYKETAGNAVPYTFKGT-- 882
            ...||.:. .||:                         |.|   |.|..||   |.|:..|.|  
  Rat  2419 CCFCNEHF-SFTM-------------------------LHF---IKNQLET---APPHELKNTFQ 2451

  Fly   883 -------IKDLVSYTKQSSTKRIFYQR---LSLSIH--ELDNKKQFKCVWVSSDLKDEKELVLYP 935
                   ::|.:...:   .|.:|...   |:|..|  .:|:.:.::||         |.||...
  Rat  2452 LLHEILVMEDPIQVER---VKFVFETENGLLALMHHSNHVDSSRCYQCV---------KFLVTLA 2504

  Fly   936 NKNDTVKGLLEEAAKKISFAENSRRKLRLLKISNHKIVAVCKDDIPLDTLLKSNESITTAQGAQK 1000
            .|....|...:|.:...|:|....:|    |:|.|....            :||.|..|:.|  |
  Rat  2505 QKCPAAKEYFKENSHHWSWAVQWLQK----KMSEHYWTP------------QSNVSNETSTG--K 2551

  Fly  1001 TFRIEEVPAED 1011
            ||: ..:.|:|
  Rat  2552 TFQ-RTISAQD 2561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp7NP_572779.2 Peptidase_C19 101..1119 CDD:470612 218/986 (22%)
Usp24NP_001258135.1 UBA_UBP24 6..42 CDD:270472
Ubl_UBP24 952..1030 CDD:340585
peptidase_C19C 1684..2041 CDD:239124 105/363 (29%)
Blue background indicates that the domain is not in the aligned region.

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