DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp7 and Usp18

DIOPT Version :9

Sequence 1:NP_572779.2 Gene:Usp7 / 32169 FlyBaseID:FBgn0030366 Length:1129 Species:Drosophila melanogaster
Sequence 2:NP_001014080.1 Gene:Usp18 / 312688 RGDID:1359153 Length:362 Species:Rattus norvegicus


Alignment Length:356 Identity:88/356 - (24%)
Similarity:150/356 - (42%) Gaps:35/356 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 DSEKSYVHNNSITLEVHVVADAPHGVLWDSKKHTGYVGLKNQGATCYMNSLLQTLYFTNSLRLSV 269
            :.||:......::.|:....|.||          |:|||.|.|.||.:|||:|........|:.:
  Rat    26 EEEKNMKRKRVLSRELCSAWDRPH----------GFVGLHNIGQTCCLNSLIQVFMMNVDFRMVL 80

  Fly   270 YRI--PTEADDSSKSVGLSLQRVFHELQFG-DRPVGTKKLTKSFGWETLDSFMQHDVQEFLRVLL 331
            .||  |..|::..:||...|..:..::|.. .:.|...:|.:......:..|:|||.......:.
  Rat    81 KRITVPRGAEEQKRSVPFQLLLLLEKMQDSRQKAVLPTELVQCLQKYNVPLFVQHDAAHLFLTIW 145

  Fly   332 DKLESKMKGTILEGTIPGLFEGKMSSYIKCKNVDYNSTRYETFYDIQLNI-----KDKKNIYESF 391
            :..:.::....|...:..||.......:.|......|:|......:.|.:     |..|.:.::.
  Rat   146 NLTKDQITDIDLAERLQDLFTIWTEESLMCVGCGAESSRRGKLLTLSLPLFDMDSKPLKTLEDAL 210

  Fly   392 QDYVAPETLEGDNKYDAGVHG----LQEASKGVIFTSFPPVLHLHLMRFQYDPVTDS-SIKYNDR 451
            :.:..|:.|...:|......|    .::|.|   .|.||..|.:|||||.   |.:| ::|....
  Rat   211 RCFFQPKELASSDKCFCETCGKKTPCKQAQK---LTGFPQTLTIHLMRFS---VRNSQTVKICHS 269

  Fly   452 FEFYEHINLDRYLAESENTLADYVLHAVLVHSGDNHGGHYVVFINPKADGRWFKFDDDVVSSCRK 516
            ..|.:.::..:.|..::.:...|.|.||:.|.|....|||..:|....||.||.|:|..|.....
  Rat   270 VYFPQSLDFSQILPTTDQSEIHYELFAVIAHVGMADFGHYCAYIRNPVDGEWFCFNDSHVCWVTW 334

  Fly   517 QEAIEQNYGGMDDEISFHAKCSNAYMLVYIR 547
            :: ::..||   |.|  :.....||:|||::
  Rat   335 KD-VQCTYG---DHI--YRWRETAYLLVYMK 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp7NP_572779.2 MATH_HAUSP 100..229 CDD:239741 5/23 (22%)
COG5077 101..1119 CDD:227409 88/356 (25%)
peptidase_C19C 239..549 CDD:239124 82/322 (25%)
USP7_ICP0_bdg 647..886 CDD:289221
USP7_C2 897..1113 CDD:291217
Usp18NP_001014080.1 UCH 52..357 CDD:278850 79/316 (25%)
Peptidase_C19 53..358 CDD:239072 79/316 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5077
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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