DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tango4 and RSA4

DIOPT Version :9

Sequence 1:NP_572778.1 Gene:Tango4 / 32168 FlyBaseID:FBgn0030365 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_009997.2 Gene:RSA4 / 850435 SGDID:S000000668 Length:515 Species:Saccharomyces cerevisiae


Alignment Length:519 Identity:123/519 - (23%)
Similarity:201/519 - (38%) Gaps:126/519 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 NLPEIDERLEKLRRSIKAKDGYGLVLDKVAKIGEARKASGA--QTPGDKTLAITDGSATDAASGA 94
            :||.:         |||.:     .||....:|.|.:..||  :...::.|...:|::.|.....
Yeast    28 DLPNV---------SIKFQ-----ALDTGDNVGGALRVPGAISEKQLEELLNQLNGTSDDPVPYT 78

  Fly    95 GSLVKYNAGARPAEKTAPLVTGTHTSLVRASLANSNADM-----------------SANGAIASH 142
            .|.......|....||..:....::||::... ||..|.                 .::.|||.|
Yeast    79 FSCTIQGKKASDPVKTIDITDNLYSSLIKPGY-NSTEDQITLLYTPRAVFKVKPVTRSSSAIAGH 142

  Fly   143 LQLIPKKAPSIPKPKWHAPWKLSRVIS----------------------GHLGWVRCIAVEPGNE 185
            ...|...|        .||...||:::                      ||..||.|::..|..|
Yeast   143 GSTILCSA--------FAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGE 199

  Fly   186 WFATGAGDRVIKIWDLASGK-LKLSLTGHVSTVRGVAVSTKH-------PYLFSCGEDRQVKCWD 242
            ..|||:.|..|::||..||: |..:|.||...:..::....|       |.|.|..:|..:|.||
Yeast   200 VIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWD 264

  Fly   243 LEYNKVIRH-YHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRT--------KANVHTLT--- 295
             ..::|.:: ..||.::| |........:|.:...|.|.|:||:.:        |::.|.:.   
Yeast   265 -TVSRVCQYTMSGHTNSV-SCVKWGGQGLLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLS 327

  Fly   296 ------------GHTNTVASVVAQA-----------------TNPQIITGSHDSTVRLWD-LAAG 330
                        .||....|...:|                 :...::|.|.|.|:.||: |.:.
Yeast   328 LSTDYALRIGAFDHTGKKPSTPEEAQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWNPLKST 392

  Fly   331 KSVCTLTNHKKSVRSIVLHPSLYMFASASPDN-IKQWRCPEGKFVQNISGHTSIVNCMAANSE-G 393
            |.:..:|.|:|.|..:...|......|||.|| ||.|...:|||:....||.:.|..:|.:|: .
Yeast   393 KPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCR 457

  Fly   394 VLVSGGDNGTMFFWDWRTGYNFQRFQAPVQPGSMDSEAGIFAMCFDQSGSRLITAEADKTIKVY 457
            :|||...:.|:..||.||     |..:...||..|.   ::.:.:...|.|:.:...||.::::
Yeast   458 LLVSCSKDTTLKVWDVRT-----RKLSVDLPGHKDE---VYTVDWSVDGKRVCSGGKDKMVRLW 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tango4NP_572778.1 WD40 <161..458 CDD:225201 93/371 (25%)
WD40 164..458 CDD:238121 92/368 (25%)
WD40 repeat 177..212 CDD:293791 14/35 (40%)
WD40 repeat 218..254 CDD:293791 9/43 (21%)
WD40 repeat 259..295 CDD:293791 10/43 (23%)
WD40 repeat 302..337 CDD:293791 10/52 (19%)
WD40 repeat 343..378 CDD:293791 13/35 (37%)
WD40 repeat 386..426 CDD:293791 12/40 (30%)
WD40 repeat 433..457 CDD:293791 4/23 (17%)
RSA4NP_009997.2 NLE 32..>79 CDD:400462 12/60 (20%)
WD40 135..472 CDD:238121 88/346 (25%)
WD40 repeat 189..227 CDD:293791 15/37 (41%)
WD40 repeat 233..276 CDD:293791 9/43 (21%)
WD40 repeat 281..316 CDD:293791 8/35 (23%)
WD40 repeat 324..399 CDD:293791 12/74 (16%)
WD40 repeat 405..441 CDD:293791 13/35 (37%)
WD40 repeat 447..483 CDD:293791 12/40 (30%)
WD40 475..513 CDD:197651 9/45 (20%)
WD40 repeat 489..513 CDD:293791 4/23 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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