DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tango4 and AT1G19750

DIOPT Version :9

Sequence 1:NP_572778.1 Gene:Tango4 / 32168 FlyBaseID:FBgn0030365 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_173405.2 Gene:AT1G19750 / 838564 AraportID:AT1G19750 Length:450 Species:Arabidopsis thaliana


Alignment Length:417 Identity:95/417 - (22%)
Similarity:161/417 - (38%) Gaps:119/417 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 ISGHLGWVRCIAVE-PGNEWFATGAGDRVIKIWDL-------ASG---KLKLSLT-------GH- 213
            :|.|.|.|..:.|: ....:..:||.|....::|:       |||   |.|...|       || 
plant    39 VSPHRGSVNSLQVDLTEGRYLLSGAADGSAAVFDVKRATDYEASGLIAKHKCIFTVRKQHENGHK 103

  Fly   214 --VSTVRGVAVSTKHPYLFSCGE-DRQVKCWDLEYNKVIRHY----HGHLSAVYSLALHPTIDVL 271
              :|:.....:.|.   :|..|. |..||.||...::|:..:    ..:.:|:.|:|:..|:  :
plant   104 YAISSAIWYPIDTG---MFITGSFDHYVKVWDTNTSQVVVDFKMPGKVYRTAMSSMAMSHTL--I 163

  Fly   272 ATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQII-TGSHDSTVRLWDLAAGKSVCT 335
            |....|...|:.|:.:.|..|||:||.:.|.||....::..:: ||..|..:|.||:........
plant   164 AAGTDDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGCFRV 228

  Fly   336 LTNHKK--SVRSIVL-HPSL-YMFASASPDNI--KQW-RCPEGKFV--QNISG------------ 379
            |.|.:.  .||..:| .|:: ..|.||:..::  :.| :..:.|..  |::.|            
plant   229 LDNSQTQLGVRPPILKRPAVSSKFFSAAKSSLGDQNWLKTLQSKHTGSQSVKGSSSEKPSVEKSR 293

  Fly   380 -----------------HTSIVNCMAANSEGV-LVSGGDNGTMFFWDWRTG----YNFQ--RFQA 420
                             |..:|..:.|.::|: |:|.|....:..||..:|    .||:  |.|.
plant   294 QKRIHPGMLSTLDRATAHYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGRNTLVNFETGRIQT 358

  Fly   421 --PVQPGSMDSEAGIF-----------------------------AMCFDQSGSRLITAEADKTI 454
              .:|..:.|..|.:|                             ..||:.:...|.|:.||:.|
plant   359 DRAIQLDTSDDPALVFVPCMKTVKGFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGADRQI 423

  Fly   455 KVYK-----EDD----EASEESHPINW 472
            .|:.     ||:    |.:|:..  ||
plant   424 IVWSPGGSVEDEMAQGEVAEDKD--NW 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tango4NP_572778.1 WD40 <161..458 CDD:225201 89/392 (23%)
WD40 164..458 CDD:238121 89/392 (23%)
WD40 repeat 177..212 CDD:293791 11/52 (21%)
WD40 repeat 218..254 CDD:293791 9/40 (23%)
WD40 repeat 259..295 CDD:293791 10/35 (29%)
WD40 repeat 302..337 CDD:293791 8/35 (23%)
WD40 repeat 343..378 CDD:293791 10/41 (24%)
WD40 repeat 386..426 CDD:293791 13/48 (27%)
WD40 repeat 433..457 CDD:293791 8/52 (15%)
AT1G19750NP_173405.2 WD40 24..428 CDD:225201 89/393 (23%)
WD40 42..427 CDD:295369 88/389 (23%)
WD40 repeat 49..101 CDD:293791 11/51 (22%)
WD40 repeat 106..146 CDD:293791 10/42 (24%)
WD40 repeat 154..187 CDD:293791 10/34 (29%)
WD40 repeat 193..230 CDD:293791 9/36 (25%)
WD40 repeat 253..296 CDD:293791 6/42 (14%)
WD40 repeat 315..352 CDD:293791 10/36 (28%)
WD40 repeat 360..396 CDD:293791 4/35 (11%)
WD40 repeat 402..426 CDD:293791 7/23 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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