DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tango4 and AT4G04940

DIOPT Version :9

Sequence 1:NP_572778.1 Gene:Tango4 / 32168 FlyBaseID:FBgn0030365 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_567275.1 Gene:AT4G04940 / 825833 AraportID:AT4G04940 Length:910 Species:Arabidopsis thaliana


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tango4NP_572778.1 WD40 <161..458 CDD:225201
WD40 164..458 CDD:238121
WD40 repeat 177..212 CDD:293791
WD40 repeat 218..254 CDD:293791
WD40 repeat 259..295 CDD:293791
WD40 repeat 302..337 CDD:293791
WD40 repeat 343..378 CDD:293791
WD40 repeat 386..426 CDD:293791
WD40 repeat 433..457 CDD:293791
AT4G04940NP_567275.1 WD40 repeat 135..179 CDD:293791
WD40 <146..342 CDD:392136
WD40 repeat 184..220 CDD:293791
WD40 repeat 228..264 CDD:293791
WD40 267..585 CDD:392136
WD40 repeat 271..310 CDD:293791
WD40 repeat 318..357 CDD:293791
WD40 repeat 376..405 CDD:293791
WD40 repeat 428..472 CDD:293791
WD40 repeat 477..503 CDD:293791
WD40 repeat 516..554 CDD:293791
WD40 549..>626 CDD:392136
WD40 repeat 560..593 CDD:293791
Utp21 665..906 CDD:367863
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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