DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tango4 and AT3G45620

DIOPT Version :9

Sequence 1:NP_572778.1 Gene:Tango4 / 32168 FlyBaseID:FBgn0030365 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_001190014.1 Gene:AT3G45620 / 823704 AraportID:AT3G45620 Length:515 Species:Arabidopsis thaliana


Alignment Length:504 Identity:109/504 - (21%)
Similarity:174/504 - (34%) Gaps:159/504 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 ARPAEKTAPLVTGTHTSLVRASLANSNADMSANGAIASHLQLIPKKAPSIPKPKWHA-------- 160
            |||..:...:..| .|.:....:..|:....:....||..:::..   |:||.|.:.        
plant     2 ARPRRRNTEIGDG-FTEIFNREIGFSHPITISRRISASEFRIMDL---SVPKTKCYGLSVFCRML 62

  Fly   161 ----PWKLSRVIS-------------GHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKL 208
                |  :.|:||             ||.|.|..:......:...:|:.||.|.:|:..||..||
plant    63 RKSEP--IQRLISGRVKKLDLYGKLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKL 125

  Fly   209 SL-TGH-------------------------------------VSTVR---------GVAVSTKH 226
            |. :||                                     |.|.|         .:||....
plant   126 SYPSGHCENVFQTKFIPFTDDRTIITSGADGQVRLGQILENGKVETKRLGRHHGRVYKLAVLPGD 190

  Fly   227 PYLF-SCGEDRQVKCWDLEYNKVI-------------RHYHGHLSAVYSLALHPTID-VLATSGR 276
            |.:| |||||..|:.:|:..|...             ||:......:.|:|:.|... .||..|.
plant   191 PNVFYSCGEDGFVQHFDIRSNSATMVLYSSPFTQGCRRHHSSSRIRLNSIAIDPRNSYYLAVGGS 255

  Fly   277 DSTARIWDMRTKANVHTLTGH------TNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCT 335
            |..||::|.| :..:..:..|      .||......:.||...|||          ||..|:...
plant   256 DEYARVYDTR-RVQLAPVCRHVLPDAPVNTFCPRHLRETNSVHITG----------LAYSKAGEL 309

  Fly   336 LTNHKKSVRSIVLHPSLYMF----------ASASPDNIKQWRCPE----GKFVQNISGHTSIVNC 386
            |.::...:        :|:|          .|.||:.:::...|:    .:..|.:.|    ||.
plant   310 LVSYNDEL--------IYLFEKNMGYGSSPVSVSPEKLQEMEEPQVYIGHRNAQTVKG----VNF 362

  Fly   387 MAANSEGVLVSGGDNGTMFFWDWRTGYNFQRFQAPVQP----GSMDSEAGI--FAMCFDQSGSRL 445
            ...|.|.| .||.|.|.:|.|..:.|   :..:|.|..    ..::|...|  .|.|..:...:|
plant   363 FGPNDEYV-TSGSDCGHIFIWKKKGG---KLVRAMVGDRRVVNQLESHPHIPLLASCGIEKSVKL 423

  Fly   446 ITAEA-------DKTIKVYKEDDEASEESHPINWRPDL------LKRRK 481
            .|..:       :|..||.:.:....|:...:...||:      |:||:
plant   424 WTPMSNDVLSLPEKIDKVMELNRVGREDQSRVTLTPDVIMHVLRLQRRQ 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tango4NP_572778.1 WD40 <161..458 CDD:225201 91/404 (23%)
WD40 164..458 CDD:238121 90/401 (22%)
WD40 repeat 177..212 CDD:293791 10/35 (29%)
WD40 repeat 218..254 CDD:293791 15/58 (26%)
WD40 repeat 259..295 CDD:293791 11/36 (31%)
WD40 repeat 302..337 CDD:293791 8/34 (24%)
WD40 repeat 343..378 CDD:293791 7/48 (15%)
WD40 repeat 386..426 CDD:293791 12/43 (28%)
WD40 repeat 433..457 CDD:293791 7/32 (22%)
AT3G45620NP_001190014.1 WD40 81..424 CDD:295369 82/369 (22%)
WD40 <81..424 CDD:225201 82/369 (22%)
WD40 repeat 94..130 CDD:293791 10/35 (29%)
WD40 repeat 136..176 CDD:293791 3/39 (8%)
WD40 repeat 181..228 CDD:293791 12/46 (26%)
WD40 repeat 238..291 CDD:293791 14/53 (26%)
WD40 repeat 298..349 CDD:293791 13/68 (19%)
WD40 repeat 400..424 CDD:293791 4/23 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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