DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tango4 and FVE

DIOPT Version :9

Sequence 1:NP_572778.1 Gene:Tango4 / 32168 FlyBaseID:FBgn0030365 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_565456.2 Gene:FVE / 816471 AraportID:AT2G19520 Length:507 Species:Arabidopsis thaliana


Alignment Length:349 Identity:86/349 - (24%)
Similarity:129/349 - (36%) Gaps:89/349 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 AIASHLQLIPKKAPSIPKPKWHAPWKLSRVISGHLGWVRCIAVEPGN-EWFATGAGDRVIKIWDL 201
            |.|.|:....::|.| |..|     |...:|  |.|.|..|...|.| :..||......:.|||:
plant   138 AAAEHISQFNEEARS-PFVK-----KYKTII--HPGEVNRIRELPQNSKIVATHTDSPDVLIWDV 194

  Fly   202 ------------ASGKLKLSLTGHVSTVR-GVAVSTKHPYLFSCGEDRQVKCWDLE--------- 244
                        |:.:..|.||||..... .:|:....|::.|.|:|:.|..|.::         
plant   195 ETQPNRHAVLGAANSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIQDHITTIGTD 259

  Fly   245 ---YNKVIRH------------------YHGHLSAVYSLALHPT-IDVLATSGRDSTARIWDMRT 287
               ...:|:.                  ||||...|..:|..|| .....:.|.||...:||.||
plant   260 SKSSGSIIKQTGEGTDKNESPTVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDART 324

  Fly   288 KANVHTLTGHTNTVASVVAQATNPQ----IITGSHDSTVRLWD---LAA---GKSVCTLTNHKKS 342
            ..|..|.....:. |.:.....||.    |:|||.|:||||:|   |.|   |..:.....||.:
plant   325 GTNPVTKVEKAHD-ADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAA 388

  Fly   343 VRSIVLHP-SLYMFASASPDNIKQ-W-------------RCPEGKFVQNISGHTSIVN------- 385
            |..:...| ...:|.|::.|.:.. |             :.|.|.|.|:......:|:       
plant   389 VLCVQWSPDKSSVFGSSAEDGLLNIWDYDRVSKKSDRAAKSPAGLFFQHAGHRDKVVDFHWNASD 453

  Fly   386 --CMAANSEGVLVSGGDNGTMFFW 407
              .:.:.|:....:|| .||:..|
plant   454 PWTIVSVSDDCETTGG-GGTLQIW 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tango4NP_572778.1 WD40 <161..458 CDD:225201 79/326 (24%)
WD40 164..458 CDD:238121 78/323 (24%)
WD40 repeat 177..212 CDD:293791 11/47 (23%)
WD40 repeat 218..254 CDD:293791 9/66 (14%)
WD40 repeat 259..295 CDD:293791 13/36 (36%)
WD40 repeat 302..337 CDD:293791 16/44 (36%)
WD40 repeat 343..378 CDD:293791 10/49 (20%)
WD40 repeat 386..426 CDD:293791 6/22 (27%)
WD40 repeat 433..457 CDD:293791
FVENP_565456.2 CAF1C_H4-bd 66..134 CDD:403473
WD40 163..477 CDD:421866 77/316 (24%)
WD40 repeat 168..217 CDD:293791 11/48 (23%)
WD40 repeat 222..289 CDD:293791 8/66 (12%)
WD40 repeat 296..333 CDD:293791 12/36 (33%)
WD40 repeat 340..383 CDD:293791 15/42 (36%)
WD40 repeat 389..438 CDD:293791 10/48 (21%)
WD40 repeat 444..476 CDD:293791 6/32 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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