DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tango4 and wdr48

DIOPT Version :9

Sequence 1:NP_572778.1 Gene:Tango4 / 32168 FlyBaseID:FBgn0030365 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_001072858.1 Gene:wdr48 / 780319 XenbaseID:XB-GENE-976371 Length:678 Species:Xenopus tropicalis


Alignment Length:441 Identity:83/441 - (18%)
Similarity:150/441 - (34%) Gaps:129/441 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 KYNAGARPAEKTAP----LVTGTHTSLVRASLANSNADMSANGAIASHLQLIPKKAPSIPKPKWH 159
            |||.....|.:..|    |.|....|::|....|.:                 |:.|.|..    
 Frog    27 KYNRNGVNALQLDPALNRLFTAGRDSIIRIWNVNQH-----------------KQDPYIAS---- 70

  Fly   160 APWKLSRVISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVST 224
                    :..|..||..|.:....:...:.:.|..:|:|:...|....:|..|...|:.:|.:.
 Frog    71 --------MEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAK 127

  Fly   225 KHPYLFSCGEDRQVKCWDLE-------YNKVI--RHYHGHLSAVYSLALHPTIDVLATSGRDSTA 280
            ....:.|.|.|||:..||:.       .|..:  ....|:..::||||::....|:.:...:...
 Frog   128 DKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVL 192

  Fly   281 RIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRS 345
            |:||.||...:..|.|||:.|.:::......|.::||.|.|:|||.|...:.:.|...|.:.|.:
 Frog   193 RVWDPRTCQKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWA 257

  Fly   346 IVLH----------------------------------------------PSLYMFASASPDNIK 364
            :.::                                              |.|.::.:.:..::.
 Frog   258 LQVNEGFTHVYSGGRDRKIYCTDLRNPDIRLLICEEKAPVLKMELDRSADPPLALWVATTKSSVN 322

  Fly   365 QWR------------------------CPEGKFVQNISGHTSIVNCMAANSEGVLVSGGDNGTMF 405
            :|.                        |.:..  |.|.|..||:.|...|.:..:::...|..:.
 Frog   323 KWPIKGILNFRSSGDYENDCSTPLSPICSQPD--QVIKGGASIIQCNILNDKRHILTKDTNNNVA 385

  Fly   406 FWDWRTGYNFQ-------------RFQAPVQPG--SMDSEAGIFAMCFDQS 441
            :||.......:             ||:....|.  |:|.:.|:..:..|:|
 Frog   386 YWDVLKACKVEDLGKVDFEEEIKKRFKMVYVPNWFSVDLKTGMLTITLDES 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tango4NP_572778.1 WD40 <161..458 CDD:225201 70/375 (19%)
WD40 164..458 CDD:238121 70/372 (19%)
WD40 repeat 177..212 CDD:293791 6/34 (18%)
WD40 repeat 218..254 CDD:293791 9/44 (20%)
WD40 repeat 259..295 CDD:293791 10/35 (29%)
WD40 repeat 302..337 CDD:293791 10/34 (29%)
WD40 repeat 343..378 CDD:293791 6/104 (6%)
WD40 repeat 386..426 CDD:293791 8/54 (15%)
WD40 repeat 433..457 CDD:293791 2/9 (22%)
wdr48NP_001072858.1 WD 1 28..67 10/55 (18%)
WD40 30..300 CDD:238121 58/298 (19%)
WD40 repeat 35..73 CDD:293791 10/66 (15%)
WD 2 73..112 8/38 (21%)
WD40 repeat 79..115 CDD:293791 6/35 (17%)
WD 3 115..154 10/38 (26%)
WD40 repeat 120..160 CDD:293791 10/39 (26%)
WD 4 166..205 11/38 (29%)
WD40 repeat 172..207 CDD:293791 10/34 (29%)
WD 5 208..247 13/38 (34%)
WD40 repeat 213..249 CDD:293791 11/35 (31%)
WD 6 250..289 2/38 (5%)
WD40 repeat 255..281 CDD:293791 1/25 (4%)
WD 7 292..334 3/41 (7%)
WD 8 358..397 8/38 (21%)
DUF3337 510..674 CDD:371741
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 608..629
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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