DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tango4 and fbxw7

DIOPT Version :9

Sequence 1:NP_572778.1 Gene:Tango4 / 32168 FlyBaseID:FBgn0030365 Length:482 Species:Drosophila melanogaster
Sequence 2:XP_009289569.3 Gene:fbxw7 / 564991 ZFINID:ZDB-GENE-090313-79 Length:835 Species:Danio rerio


Alignment Length:333 Identity:92/333 - (27%)
Similarity:147/333 - (44%) Gaps:43/333 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 KAPSIPKPKW-HAPWKLSRVISGH---LGWVRCIAVEP------------------GNEWFATGA 191
            |...:.||.: |:||| |..|..|   ..|.|.....|                  ||. ..:|:
Zfish   464 KRRKVIKPGFTHSPWK-SAYIRQHRIDTNWRRGDLKSPKVVLKGHDDHVITCLQFCGNR-IVSGS 526

  Fly   192 GDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYLFSCGE-DRQVKCWDLEYNKVIRHYHGH 255
            .|..:|:|...:||...:|.||..   ||..|.....:...|. ||.:|.|:.|..:.|...:||
Zfish   527 DDNTLKVWSAVTGKCLRTLVGHTG---GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGH 588

  Fly   256 LSAVYSLALHPTIDVLATSG-RDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHD 319
            .|.|..:.||   :....|| ||:|.|:||:.|...:|.|.||...|..|  |....::::|::|
Zfish   589 TSTVRCMHLH---EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV--QYDGRRVVSGAYD 648

  Fly   320 STVRLWDLAAGKSVCTLTNHKKSVRSIVLHPSLYMFASASPDNIKQWRCPEGKFVQNISGHTSIV 384
            ..|::||......:.||..|...|.|:.. ..:::.:.:...:|:.|....|..:..::||.|:.
Zfish   649 FMVKVWDPETETCLHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 712

  Fly   385 NCMAANSEGVLVSGGDNGTMFFWDWRTGYNFQRFQAPVQPGSMDSEAGIFAMCFDQSGSRLITAE 449
            :.|.. .:.:||||..:.|:..||.:||...|..|.|.:..|.       ..|...:.:.:||:.
Zfish   713 SGMEL-KDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSA-------VTCLQFNKNFVITSS 769

  Fly   450 ADKTIKVY 457
            .|.|:|::
Zfish   770 DDGTVKLW 777

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tango4NP_572778.1 WD40 <161..458 CDD:225201 88/320 (28%)
WD40 164..458 CDD:238121 85/317 (27%)
WD40 repeat 177..212 CDD:293791 10/52 (19%)
WD40 repeat 218..254 CDD:293791 10/36 (28%)
WD40 repeat 259..295 CDD:293791 13/36 (36%)
WD40 repeat 302..337 CDD:293791 8/34 (24%)
WD40 repeat 343..378 CDD:293791 5/34 (15%)
WD40 repeat 386..426 CDD:293791 13/39 (33%)
WD40 repeat 433..457 CDD:293791 6/23 (26%)
fbxw7XP_009289569.3 F-box-like 408..452 CDD:315592
WD40 503..778 CDD:238121 79/293 (27%)
WD40 repeat 512..547 CDD:293791 9/35 (26%)
WD40 repeat 553..587 CDD:293791 8/33 (24%)
WD40 repeat 592..626 CDD:293791 13/36 (36%)
WD40 repeat 633..666 CDD:293791 8/34 (24%)
WD40 repeat 672..706 CDD:293791 5/34 (15%)
WD40 repeat 714..746 CDD:293791 11/32 (34%)
WD40 repeat 755..777 CDD:293791 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.