DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tango4 and daw1

DIOPT Version :9

Sequence 1:NP_572778.1 Gene:Tango4 / 32168 FlyBaseID:FBgn0030365 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_001037817.1 Gene:daw1 / 556760 ZFINID:ZDB-GENE-050419-255 Length:418 Species:Danio rerio


Alignment Length:368 Identity:102/368 - (27%)
Similarity:168/368 - (45%) Gaps:14/368 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 GSLVKYNAGARPAEKTAPLVTGT-HTSLVRASLANSNADMSANGAIASHLQLIPKKAPSIPKPKW 158
            |..:.|..|.:...|...|:..| .|.:....|....|:.....:....::|:..|.......|.
Zfish    14 GIFLDYEKGGQLRTKCIDLLNLTPETDVEELVLEIRAAEPLITSSCVEQVKLLICKLQEKVSQKD 78

  Fly   159 HAPWKLSRVISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVS 223
            ...:.|.|.:..|:..:..:|.......|.||:.||..||||.|||:...:|.||.:.|..:|.:
Zfish    79 ERKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFN 143

  Fly   224 TKHPYLFSCGE-DRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRT 287
            ..:....:.|. |:..|.|..|..|....:.||.:.:..||.:|...::||...|:||::||:.:
Zfish   144 NPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVES 208

  Fly   288 KANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHPSL 352
            ...|.||.||...:.|:....|..:::|||.|.|..|||:.:|:.|..|:.|:..:..:..:...
Zfish   209 GEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDC 273

  Fly   353 YMFASASPD-NIKQWRCPEGKFVQNISGHTSIVNCMAANSEGVLV-SGGDNGTMFFWDWRTGYNF 415
            .:.|:||.| :.|.|....|:.:..:.||...|..:..|..|.|: :...:||...:...|    
Zfish   274 SLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDT---- 334

  Fly   416 QRFQAPVQPGSMDSEAG-IFAMCFDQSGSRLITAEADKTIKVY 457
              ||...|   ::...| |..:||:..|||::||..|||.:|:
Zfish   335 --FQCLCQ---LEGHKGEISKVCFNAQGSRVLTASVDKTSRVW 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tango4NP_572778.1 WD40 <161..458 CDD:225201 90/301 (30%)
WD40 164..458 CDD:238121 90/298 (30%)
WD40 repeat 177..212 CDD:293791 14/34 (41%)
WD40 repeat 218..254 CDD:293791 7/36 (19%)
WD40 repeat 259..295 CDD:293791 12/35 (34%)
WD40 repeat 302..337 CDD:293791 12/34 (35%)
WD40 repeat 343..378 CDD:293791 7/35 (20%)
WD40 repeat 386..426 CDD:293791 9/40 (23%)
WD40 repeat 433..457 CDD:293791 11/23 (48%)
daw1NP_001037817.1 CEP19 4..>81 CDD:291594 12/66 (18%)
WD40 84..372 CDD:238121 89/296 (30%)
WD40 88..405 CDD:225201 88/294 (30%)
WD 1 90..129 14/38 (37%)
WD40 repeat 95..132 CDD:293791 14/36 (39%)
WD 2 132..172 10/39 (26%)
WD40 repeat 137..175 CDD:293791 8/37 (22%)
WD 3 175..214 13/38 (34%)
WD40 repeat 181..217 CDD:293791 13/35 (37%)
WD 4 217..256 14/38 (37%)
WD40 repeat 222..258 CDD:293791 12/35 (34%)
WD 5 259..298 8/38 (21%)
WD40 repeat 265..300 CDD:293791 7/34 (21%)
WD 6 301..340 11/44 (25%)
WD40 repeat 306..342 CDD:293791 10/44 (23%)
WD 7 343..384 13/30 (43%)
WD40 repeat 348..384 CDD:293791 12/25 (48%)
WD40 376..>405 CDD:197651
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53955
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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