DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tango4 and eed

DIOPT Version :9

Sequence 1:NP_572778.1 Gene:Tango4 / 32168 FlyBaseID:FBgn0030365 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_001017325.1 Gene:eed / 550079 XenbaseID:XB-GENE-491480 Length:438 Species:Xenopus tropicalis


Alignment Length:462 Identity:87/462 - (18%)
Similarity:159/462 - (34%) Gaps:135/462 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 KASGAQTPGDKTLAITDGSATDAASGAGSLVKYNAGARPAEKTAPLVTGTHTSLVRASLANSNAD 132
            :.:|.:.|..|....:|.::....||..:           :.|..:.:||:|             
 Frog     7 RTAGNEMPAKKQKLSSDENSNPELSGDEN-----------DDTVSIESGTNT------------- 47

  Fly   133 MSANGAIASHLQLIPKKAPSIPKPKWHAPWKLSRVISGHLGW-------------VRCI--AVEP 182
                            :.|..|....:||        |..||             .:|:  ..|.
 Frog    48 ----------------ERPDTPTNAANAP--------GRKGWGKGKWKSKKCKYSFKCVNSLKED 88

  Fly   183 GNE--------W---------FATGAGDRVIKIWDLASGKLKLSLTGHV---------STVRGVA 221
            .|:        |         |||...:||........|:::| |..:|         :......
 Frog    89 HNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHPQGEIRL-LQSYVDADADENFYTCAWTYD 152

  Fly   222 VSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHP-TIDVLATSGRDSTARIWDM 285
            .:|.||.|...|....::..:....:.|:||.||.:|:..|..|| ..::|.:..:|...|:|::
 Frog   153 SNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNI 217

  Fly   286 RTKANVHT---LTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLT-----NHKKS 342
            :|...|..   :.||.:.|.|........:|::...|.:::||.:.:.:....:.     |..|:
 Frog   218 QTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSLRMKTAIRESYEYNPNKT 282

  Fly   343 VRSIV---LHPSLYMFASASPDNIKQWRCPEGKFVQNISGHTSIVNCMAANSEGVLVSGGDNGTM 404
            .|..|   :|     |...|..:|                |.:.|:|:....:.:|....:|..:
 Frog   283 NRPFVSQKIH-----FPDFSTRDI----------------HRNYVDCVRWLGDLILSKSCENAIV 326

  Fly   405 FFWDWRTGY---NFQRFQAPVQP----GSMD-SEAGIFAMCFDQSGSRLITAEADKTIKVYKEDD 461
            .   |:.|.   :..:.:|....    |..| |:..|:.|.|.....:.:.|..::..|:|..|.
 Frog   327 C---WKPGKMEDDIDKIKASESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDL 388

  Fly   462 EASEESH 468
            |. |:.|
 Frog   389 EV-EDPH 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tango4NP_572778.1 WD40 <161..458 CDD:225201 69/357 (19%)
WD40 164..458 CDD:238121 68/354 (19%)
WD40 repeat 177..212 CDD:293791 12/53 (23%)
WD40 repeat 218..254 CDD:293791 8/35 (23%)
WD40 repeat 259..295 CDD:293791 9/39 (23%)
WD40 repeat 302..337 CDD:293791 5/34 (15%)
WD40 repeat 343..378 CDD:293791 6/37 (16%)
WD40 repeat 386..426 CDD:293791 6/46 (13%)
WD40 repeat 433..457 CDD:293791 5/23 (22%)
eedNP_001017325.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..70 17/110 (15%)
WD 1 88..131 8/42 (19%)
WD40 repeat 93..137 CDD:293791 9/44 (20%)
WD 2 139..182 6/42 (14%)
WD40 repeat 145..185 CDD:293791 8/39 (21%)
WD40 147..435 CDD:392136 57/273 (21%)
WD 3 185..225 12/39 (31%)
WD40 repeat 190..227 CDD:293791 9/36 (25%)
WD 4 231..270 8/38 (21%)
WD40 repeat 237..299 CDD:293791 12/66 (18%)
WD 5 301..338 8/55 (15%)
WD40 repeat 306..354 CDD:293791 8/50 (16%)
WD 6 356..396 11/40 (28%)
WD40 repeat 362..402 CDD:293791 9/34 (26%)
WD 7 405..438
WD40 repeat 410..434 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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