DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tango4 and poc1a

DIOPT Version :9

Sequence 1:NP_572778.1 Gene:Tango4 / 32168 FlyBaseID:FBgn0030365 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_001016608.1 Gene:poc1a / 549362 XenbaseID:XB-GENE-5767105 Length:441 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tango4NP_572778.1 WD40 <161..458 CDD:225201
WD40 164..458 CDD:238121
WD40 repeat 177..212 CDD:293791
WD40 repeat 218..254 CDD:293791
WD40 repeat 259..295 CDD:293791
WD40 repeat 302..337 CDD:293791
WD40 repeat 343..378 CDD:293791
WD40 repeat 386..426 CDD:293791
WD40 repeat 433..457 CDD:293791
poc1aNP_001016608.1 WD40 10..298 CDD:238121
WD 1 16..55
WD40 repeat 21..58 CDD:293791
WD 2 58..97
WD40 repeat 64..100 CDD:293791
WD 3 100..139
WD40 repeat 105..141 CDD:293791
WD 4 142..181
WD40 repeat 148..182 CDD:293791
WD 5 184..223
WD40 repeat 189..225 CDD:293791
WD 6 226..265
WD40 repeat 231..267 CDD:293791
WD 7 268..307
WD40 repeat 273..297 CDD:293791
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 323..380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53955
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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