DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tango4 and Tle1

DIOPT Version :9

Sequence 1:NP_572778.1 Gene:Tango4 / 32168 FlyBaseID:FBgn0030365 Length:482 Species:Drosophila melanogaster
Sequence 2:XP_006238343.1 Gene:Tle1 / 362533 RGDID:1309237 Length:814 Species:Rattus norvegicus


Alignment Length:642 Identity:117/642 - (18%)
Similarity:189/642 - (29%) Gaps:266/642 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAMEDVQKH-------------SVHTLIFRSLKRTHDLFVSNQGNLPEIDERLEKLRRSIKAKDG 52
            :|::|.:||             |...|:..||:.|     ..:.|.||....::|  |.:..||.
  Rat   187 LAIKDDKKHHDAERHRDREPGTSNSLLVPDSLRGT-----DKRRNGPEFSSDIKK--RKVDDKDN 244

  Fly    53 Y---------GLVLDKVAKIGEARKASGAQTPG----DKTLAI---TDGS-ATDAASGAGSLVKY 100
            |         .||:|...:...:..||...:|.    ||...:   ..|| |:.|:||:.|.:| 
  Rat   245 YDSDGDKSDDNLVVDVSNEDPSSPHASPTHSPRENGIDKNRLLKKDASGSPASTASSGSSSSLK- 308

  Fly   101 NAGARPAEKTAPLVTGTHTSLVRASLANSNADMSANGAIAS------------------------ 141
                   .|...|....:|.::::|.....:||...|..|:                        
  Rat   309 -------SKEVNLHEKANTPVLKSSTPTPRSDMPTPGTSATPGLRPGLGKPPAMEPLVNQAGFGF 366

  Fly   142 HLQLIP----------------------------------------------------------- 147
            ||:|:|                                                           
  Rat   367 HLELVPGSGKFGLKEKSWILSRKSSFEIKSAAGLRTPLAVPGPYPAPFGMVPHAGMNGELTSPGA 431

  Fly   148 ---------------------------------------KKAPSIP---------KP--KWHA-- 160
                                                   .:.||||         ||  .:|.  
  Rat   432 AYAGLHSMSPQMSAAAAAAAAAVVAYGRSPMVGFDPPPHMRVPSIPPNLAGIPGGKPAYSFHVTA 496

  Fly   161 -------------------PWKLSRVISGHLGWVRCIAV--EPGNEWFATGAGDRVIKIWDLASG 204
                               |....::.:.:.|.|.|...  .|....:..|.|  .:|:||    
  Rat   497 DGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKG--CVKVWD---- 555

  Fly   205 KLKLSLTGHVSTVRGVAVSTKHPYLFSC------------GEDRQVKCWDL--EYNKVIRHYHGH 255
               :|..|:.|.|..:....:..|:.||            ||...:..|||  ...::.......
  Rat   556 ---ISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSS 617

  Fly   256 LSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDS 320
            ..|.|:||:.|...|..:...|....:||:..:..|....|||:..:.:.......::.||..|:
  Rat   618 APACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDN 682

  Fly   321 TVRLWDLAAGK------------------------------SVCTLTNHKKSVRSIVLHPSLYM- 354
            |||.|||..|:                              :|..|..:|.....:.||.|..: 
  Rat   683 TVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLS 747

  Fly   355 ---------FASASPDN-IKQWRCPEGKFVQNISGHTSIVNCMAANSEGVLVSG-GD 400
                     |.|...|| :..||.|.|..:......:|:::|..:..:..:|:| ||
  Rat   748 LKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGD 804

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tango4NP_572778.1 WD40 <161..458 CDD:225201 65/298 (22%)
WD40 164..458 CDD:238121 64/295 (22%)
WD40 repeat 177..212 CDD:293791 8/36 (22%)
WD40 repeat 218..254 CDD:293791 8/49 (16%)
WD40 repeat 259..295 CDD:293791 9/35 (26%)
WD40 repeat 302..337 CDD:293791 11/64 (17%)
WD40 repeat 343..378 CDD:293791 11/45 (24%)
WD40 repeat 386..426 CDD:293791 5/16 (31%)
WD40 repeat 433..457 CDD:293791
Tle1XP_006238343.1 TLE_N 9..143 CDD:397828
WD40 527..811 CDD:238121 64/287 (22%)
WD40 repeat 531..570 CDD:293791 11/47 (23%)
WD40 repeat 578..616 CDD:293791 7/37 (19%)
WD40 repeat 621..657 CDD:293791 9/35 (26%)
WD40 repeat 664..699 CDD:293791 10/34 (29%)
WD40 repeat 704..737 CDD:293791 3/32 (9%)
WD40 repeat 745..779 CDD:293791 8/33 (24%)
WD40 repeat 786..810 CDD:293791 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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