DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tango4 and prp5

DIOPT Version :9

Sequence 1:NP_572778.1 Gene:Tango4 / 32168 FlyBaseID:FBgn0030365 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_595604.1 Gene:prp5 / 3361260 PomBaseID:SPBP22H7.07 Length:473 Species:Schizosaccharomyces pombe


Alignment Length:475 Identity:248/475 - (52%)
Similarity:327/475 - (68%) Gaps:20/475 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VHTLIFRSLKRTHDLFVSNQGNLPEIDERL-EKLRRSIKAKDGYGLVLDKVAKIGEARKASGAQ- 73
            |.:|...||:.:..||.:..|::...|:.: :.|:|:.|....||.||.  ..:|:.:.....: 
pombe    13 VLSLTTNSLRTSKTLFGAEFGSVTSFDDTVAQNLKRTYKEHLEYGSVLG--GTVGKRKNRHYEED 75

  Fly    74 TPGDKTLAITDGSATDAASGAGSLVKYNAGARPAEKTAPLVTGTHTSLVRASLANSNADMSANGA 138
            |.|...|.:...|...::.   .:.|:   :.|.:|.|..|:       ..||........|...
pombe    76 TIGSNALTVRADSENPSSQ---VITKF---SDPNKKIAGQVS-------MQSLEKIKGVPEAAHR 127

  Fly   139 IA--SHLQLIPKKAPSIPKPKWHAPWKLSRVISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDL 201
            ||  |...|:.:......:|:|||||.|.||||||||||||:.|||||:||.||||||.||||||
pombe   128 IAGESQASLVKRTLAEQIRPEWHAPWTLMRVISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDL 192

  Fly   202 ASGKLKLSLTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHP 266
            |||.|||:||||::||||:|||.:||||||||||:.|||||||.||||||||||||.||:|.|||
pombe   193 ASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHP 257

  Fly   267 TIDVLATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGK 331
            |:|||.|:|||:.||:|||||:.|||.|:||.:||||:..|..:||::|||.|||:|||||||||
pombe   258 TLDVLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGK 322

  Fly   332 SVCTLTNHKKSVRSIVLHPSLYMFASASPDNIKQWRCPEGKFVQNISGHTSIVNCMAANSEGVLV 396
            ::.|||:|||:||::.|||..:.|||.|.||||.|:.|||.|:.|..||.:|||.::.||:.|:.
pombe   323 TLTTLTHHKKTVRALSLHPDEFTFASGSSDNIKHWKFPEGAFMGNFEGHNAIVNTLSINSDNVMF 387

  Fly   397 SGGDNGTMFFWDWRTGYNFQRFQAPVQPGSMDSEAGIFAMCFDQSGSRLITAEADKTIKVYKEDD 461
            ||.|||:|.||||::|:.:|..|:.|||||:||||||||..||::|.||||.||||::|:||:.|
pombe   388 SGADNGSMCFWDWKSGHKYQELQSVVQPGSLDSEAGIFASSFDKTGLRLITCEADKSVKIYKQVD 452

  Fly   462 EASEESHP-INWRPDLLKRR 480
            .|:.|:|| :.|.|..|:||
pombe   453 NATPETHPNLPWTPSNLRRR 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tango4NP_572778.1 WD40 <161..458 CDD:225201 200/296 (68%)
WD40 164..458 CDD:238121 198/293 (68%)
WD40 repeat 177..212 CDD:293791 27/34 (79%)
WD40 repeat 218..254 CDD:293791 29/35 (83%)
WD40 repeat 259..295 CDD:293791 24/35 (69%)
WD40 repeat 302..337 CDD:293791 21/34 (62%)
WD40 repeat 343..378 CDD:293791 19/34 (56%)
WD40 repeat 386..426 CDD:293791 19/39 (49%)
WD40 repeat 433..457 CDD:293791 15/23 (65%)
prp5NP_595604.1 WD40 <143..402 CDD:225201 176/258 (68%)
WD40 155..449 CDD:238121 198/293 (68%)
WD40 repeat 168..203 CDD:293791 27/34 (79%)
WD40 repeat 209..245 CDD:293791 29/35 (83%)
WD40 repeat 250..286 CDD:293791 24/35 (69%)
WD40 repeat 293..328 CDD:293791 21/34 (62%)
WD40 repeat 334..369 CDD:293791 19/34 (56%)
WD40 repeat 375..414 CDD:293791 18/38 (47%)
WD40 repeat 424..448 CDD:293791 15/23 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 91 1.000 Domainoid score I2036
eggNOG 1 0.900 - - E1_KOG0285
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2004
Inparanoid 1 1.050 489 1.000 Inparanoid score I256
OMA 1 1.010 - - QHG53955
OrthoFinder 1 1.000 - - FOG0004264
OrthoInspector 1 1.000 - - oto101044
orthoMCL 1 0.900 - - OOG6_101928
Panther 1 1.100 - - LDO PTHR19923
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R995
SonicParanoid 1 1.000 - - X3002
TreeFam 1 0.960 - -
1413.860

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