DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tango4 and Wdr5b

DIOPT Version :9

Sequence 1:NP_572778.1 Gene:Tango4 / 32168 FlyBaseID:FBgn0030365 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_001019937.1 Gene:Wdr5b / 303907 RGDID:1308567 Length:328 Species:Rattus norvegicus


Alignment Length:321 Identity:83/321 - (25%)
Similarity:150/321 - (46%) Gaps:18/321 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 PKKAPSIPKPKWHAPWKLSRVISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLT 211
            |::.....||.    :.|...::||...:..:...|..||.|:.|.|.:|.||....||.|.:|.
  Rat    18 PQRVEEPQKPN----YALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGKCKKTLY 78

  Fly   212 GHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGR 276
            ||...:..||.|:....|.|..:|:.:|.||:...|.::...||...|:....:|..:::.:...
  Rat    79 GHSLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSF 143

  Fly   277 DSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNH-K 340
            |.:.:||:::|...:.||:.|::.:::|........|::||:|...|:||.|:|:.:.||.:. .
  Rat   144 DESVKIWEVKTGKCLKTLSAHSDPISAVHFHCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGN 208

  Fly   341 KSVRSIVLHPS-LYMFASASPDNIKQWRCPEGKFVQNISGHTSIVNCMAAN----SEGVLVSGGD 400
            ..|..:...|: .|:..:.....:|.|....|:.::..:||.:...|:.|:    ....:|||.:
  Rat   209 PPVSFVKFSPNGKYILTATLDSTLKLWDYSRGRCLKTYTGHKNEKYCIFASFSVTGRKWVVSGSE 273

  Fly   401 NGTMFFWDWRTGYNFQRFQAPVQPGSMDSEAGIFAMCFDQSGSRLITA-EADKTIKVYKED 460
            :..::.|:.:|....||.|.       .::..|.|.|..........| |.|||||::..|
  Rat   274 DNMVYIWNLQTKEIVQRLQG-------HTDVVISAACHPTENIIASAALENDKTIKIWSSD 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tango4NP_572778.1 WD40 <161..458 CDD:225201 79/303 (26%)
WD40 164..458 CDD:238121 79/300 (26%)
WD40 repeat 177..212 CDD:293791 13/34 (38%)
WD40 repeat 218..254 CDD:293791 10/35 (29%)
WD40 repeat 259..295 CDD:293791 7/35 (20%)
WD40 repeat 302..337 CDD:293791 11/34 (32%)
WD40 repeat 343..378 CDD:293791 6/35 (17%)
WD40 repeat 386..426 CDD:293791 10/43 (23%)
WD40 repeat 433..457 CDD:293791 10/24 (42%)
Wdr5bNP_001019937.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 1/4 (25%)
WD40 31..325 CDD:238121 79/300 (26%)
WD40 <34..325 CDD:225201 78/297 (26%)
WD 1 37..76 14/38 (37%)
WD40 repeat 42..79 CDD:293791 13/36 (36%)
WD 2 79..120 12/40 (30%)
WD40 repeat 85..121 CDD:293791 10/35 (29%)
WD 3 122..162 8/39 (21%)
WD40 repeat 126..162 CDD:293791 7/35 (20%)
WD 4 163..202 11/38 (29%)
WD40 repeat 169..204 CDD:293791 11/34 (32%)
DDB1-binding motif 186..190 1/3 (33%)
WD 5 206..247 6/40 (15%)
WD40 repeat 211..247 CDD:293791 6/35 (17%)
WD 6 250..290 7/39 (18%)
WD40 repeat 255..292 CDD:293791 9/36 (25%)
WD 7 293..328 11/42 (26%)
WD40 repeat 298..324 CDD:293791 10/25 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53955
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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