DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tango4 and STRN3

DIOPT Version :9

Sequence 1:NP_572778.1 Gene:Tango4 / 32168 FlyBaseID:FBgn0030365 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_001077362.1 Gene:STRN3 / 29966 HGNCID:15720 Length:797 Species:Homo sapiens


Alignment Length:554 Identity:118/554 - (21%)
Similarity:197/554 - (35%) Gaps:163/554 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VSNQG------NLPEIDERLEKLRRSIKAKDGYGLVLDKVAKIGEARKASGAQTPGDKTLAITDG 85
            :.|:|      :.|:.:|.|::....:.|:||.|        .|||| :||..|..||.......
Human   283 IGNEGLAADLTDDPDTEEALKEFDFLVTAEDGEG--------AGEAR-SSGDGTEWDKDDLSPTA 338

  Fly    86 SATDAASGAGSLVKY--------NAGARPAEKTAPLVTGTHTSLVRASLANSNADMSANGAIASH 142
            ...|...|..|.:|.        ..|.:.|.:|              .|.:..||:..:      
Human   339 EVWDVDQGLISKLKEQYKKERKGKKGVKRANRT--------------KLYDMIADLGDD------ 383

  Fly   143 LQLIPKKAPSIPKPKWHAPWKLSRVISGHLGWVRCIAVEP------GNEWFATGAGDRVIKI--- 198
                  :.|.||....:.....|..::.|.| .|....||      |.:.|..|:.|.::.:   
Human   384 ------ELPHIPSGIINQSRSASTRMTDHEG-ARAEEAEPITFPSGGGKSFIMGSDDVLLSVLGL 441

  Fly   199 ---------------WDLASGK--------LKLSLTGHVSTVRGVAVSTKHPYLFSCGEDRQVKC 240
                           :||.:.|        .|.:|..|...||.:|.....|.|.:..||..:|.
Human   442 GDLADLTVTNDADYSYDLPANKDAFRKTWNPKYTLRSHFDGVRALAFHPVEPVLVTASEDHTLKL 506

  Fly   241 WDLEYN-----------KVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRT------- 287
            |:|:..           :.|..:..|:..|.|||:....:...:.|.|:|.:.|:|.:       
Human   507 WNLQKTVPAKKSASLDVEPIYTFRAHIGPVLSLAISSNGEQCFSGGIDATIQWWNMPSPSVDPYD 571

  Fly   288 --KANV--HTLTGHTNTVASVVAQATNPQIITGSHDSTVRLW----------------------- 325
              :.||  .||.|||:.|..:.......|:::.|.|.|||||                       
Human   572 TYEPNVLAGTLVGHTDAVWGLAYSGIKNQLLSCSADGTVRLWNPQEKLPCICTYNGDKKHGIPTS 636

  Fly   326 -----------------------DLAAGKSVCTLTNHKKS-------VRSIVLHPSLYMFASASP 360
                                   ||...:|:..|::...|       :..:|.||:|.:..:|..
Human   637 VDFIGCDPAHMVTSFNTGSAVIYDLETSQSLVILSSQVDSGLQSNNHINRVVSHPTLPVTITAHE 701

  Fly   361 D-NIKQWRCPEGKFVQNISGHTSIVNCMAANSEGV-LVSGGDNGTMFFWDWRTGYNFQRFQAPVQ 423
            | :||.:....||.:.::..|...|..:|.:..|: |:||..:.::..|:..:....|...|  .
Human   702 DRHIKFFDNKTGKMIHSMVAHLDAVTSLAVDPNGIYLMSGSHDCSIRLWNLDSKTCVQEITA--H 764

  Fly   424 PGSMDSEAGIFAMCFDQSGSRLITAEADKTIKVY 457
            ...:|.  .|:.:.|..|.:.:.:|.||...||:
Human   765 RKKLDE--SIYDVAFHSSKAYIASAGADALAKVF 796

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tango4NP_572778.1 WD40 <161..458 CDD:225201 87/406 (21%)
WD40 164..458 CDD:238121 87/403 (22%)
WD40 repeat 177..212 CDD:293791 11/66 (17%)
WD40 repeat 218..254 CDD:293791 10/46 (22%)
WD40 repeat 259..295 CDD:293791 12/46 (26%)
WD40 repeat 302..337 CDD:293791 11/80 (14%)
WD40 repeat 343..378 CDD:293791 10/35 (29%)
WD40 repeat 386..426 CDD:293791 8/40 (20%)
WD40 repeat 433..457 CDD:293791 7/23 (30%)
STRN3NP_001077362.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..60
Striatin 64..190 CDD:285445
Caveolin-binding. /evidence=ECO:0000255 71..79
Calmodulin-binding. /evidence=ECO:0000255 166..183
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 224..278
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 313..338 12/33 (36%)
WD40 473..>790 CDD:225201 70/320 (22%)
WD40 475..796 CDD:238121 72/324 (22%)
WD 1 478..517 11/38 (29%)
WD40 repeat 485..531 CDD:293791 9/45 (20%)
WD 2 531..570 10/38 (26%)
WD40 repeat 537..584 CDD:293791 12/46 (26%)
WD 3 584..623 12/38 (32%)
WD40 repeat 589..626 CDD:293791 9/36 (25%)
WD40 repeat 635..671 CDD:293791 3/35 (9%)
WD 4 679..718 10/38 (26%)
WD40 repeat 684..720 CDD:293791 10/35 (29%)
WD 5 721..760 8/38 (21%)
WD40 repeat 726..765 CDD:293791 9/40 (23%)
WD 6 767..796 8/30 (27%)
WD40 repeat 772..796 CDD:293791 7/23 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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