DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tango4 and utp13

DIOPT Version :9

Sequence 1:NP_572778.1 Gene:Tango4 / 32168 FlyBaseID:FBgn0030365 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_587989.2 Gene:utp13 / 2539337 PomBaseID:SPCC16A11.02 Length:777 Species:Schizosaccharomyces pombe


Alignment Length:508 Identity:106/508 - (20%)
Similarity:189/508 - (37%) Gaps:154/508 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 RSIKAKDGYGLVL-----------------DKVAKIGEARKASGAQT----------------PG 76
            ||:...:|:..|:                 ||..::...:|.|..:|                |.
pombe   180 RSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVNGQPE 244

  Fly    77 DKTLAITDGSATDAASGAGSLV---KYNAGARPAEKTAPLVTGTHT---SLVRASLANSNADMSA 135
            :|.|         ..:|.|:|:   .:.:|:|    ..|.|..||:   ::::....:.|..:|.
pombe   245 EKIL---------YTAGEGNLILAWDWKSGSR----LDPGVDTTHSETNAIIQVVPFSENTLLSV 296

  Fly   136 NGAIASHLQLIPKKAP-----SIPKPKW------HAPW-----------------------KLSR 166
            :..::   .|:.|:.|     :|.|...      ...|                       ::..
pombe   297 HSDLS---LLLRKRVPGEGFITIKKLNGSFDEVIDCAWIGDDHLAVCSNTEFIDVISTDGTQVFG 358

  Fly   167 VISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYLFS 231
            |:.||...|..:.......|.||||.|..:::|:|..                            
pombe   359 VLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNI---------------------------- 395

  Fly   232 CGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDV------LATSGRDSTARIWDMRTKAN 290
              ||...||        |..:.||.::|.::||.| :||      ||:|.:|.|.:.:::.::.|
pombe   396 --EDNVYKC--------IHVFTGHTASVTAVALGP-LDVNGYPTFLASSSQDRTLKRFNLGSQLN 449

  Fly   291 --------VHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIV 347
                    |.|:..|...|.::........|.:.|.|.|::|||.:.|:.|..|..|::.|.:..
pombe   450 KSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACS 514

  Fly   348 LHPSLYMFASASPD-NIKQWRCPEGKFVQNISGHTSIVNCMAANSEGV-LVSGGDNGTMFFWDWR 410
            .:|.....||.|.| .|:.|.....:.||.:.|||..:..:...|:|. :||...:|.:..|...
pombe   515 FNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLS 579

  Fly   411 TGYNFQRFQAPVQPGSMDS-EAGIFAMCFDQSGSRLITAEADKTIKVYKEDDE 462
            :|...         .::|: |..::|:.....||.|::..||..:.|:|:..|
pombe   580 SGECV---------ATLDNHEDRVWALASRFDGSLLVSGGADAVVSVWKDVTE 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tango4NP_572778.1 WD40 <161..458 CDD:225201 76/336 (23%)
WD40 164..458 CDD:238121 75/310 (24%)
WD40 repeat 177..212 CDD:293791 8/34 (24%)
WD40 repeat 218..254 CDD:293791 5/35 (14%)
WD40 repeat 259..295 CDD:293791 14/49 (29%)
WD40 repeat 302..337 CDD:293791 9/34 (26%)
WD40 repeat 343..378 CDD:293791 10/35 (29%)
WD40 repeat 386..426 CDD:293791 7/40 (18%)
WD40 repeat 433..457 CDD:293791 6/23 (26%)
utp13NP_587989.2 WD40 52..542 CDD:225201 83/416 (20%)
WD40 62..535 CDD:238121 82/409 (20%)
WD40 repeat 65..101 CDD:293791
WD40 repeat 106..142 CDD:293791
WD40 repeat 149..186 CDD:293791 2/5 (40%)
WD40 repeat 192..231 CDD:293791 5/38 (13%)
WD40 316..619 CDD:238121 78/350 (22%)
WD40 repeat 328..362 CDD:293791 2/33 (6%)
WD40 repeat 367..408 CDD:293791 14/78 (18%)
WD40 repeat 414..463 CDD:293791 13/49 (27%)
WD40 repeat 468..504 CDD:293791 10/35 (29%)
WD40 repeat 511..546 CDD:293791 9/34 (26%)
WD40 repeat 552..588 CDD:293791 7/44 (16%)
Utp13 640..777 CDD:285789
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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