DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tango4 and T02H6.1

DIOPT Version :9

Sequence 1:NP_572778.1 Gene:Tango4 / 32168 FlyBaseID:FBgn0030365 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_872030.2 Gene:T02H6.1 / 173461 WormBaseID:WBGene00020171 Length:518 Species:Caenorhabditis elegans


Alignment Length:505 Identity:107/505 - (21%)
Similarity:187/505 - (37%) Gaps:104/505 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AMEDVQKHSVHTLIFRSLKRTHDLFVSNQGNLPEIDERLEKLRRSIKAKDGYGLVLDKVAKIGEA 66
            |..||:....|...:|..|:..|...|......|:.|:|..               |.||:.|..
 Worm    69 AGSDVEYEDAHERNYREAKKLLDKIQSTTTTQEEVAEKLRD---------------DAVARTGTQ 118

  Fly    67 RKASGAQTPGDKTLAIT---------------DGSATDAASGAGSLVKYNAGARPAEKTAPLVTG 116
            .|........:..|.|:               |.....:.....|:||:|.|.|   |...::..
 Worm   119 VKRVADVVELEDDLEISYKPHRLSPLCVAFSPDAKYVISCGKESSIVKFNVGTR---KVVGIIKR 180

  Fly   117 THTSLVRASLANSNADMSANGAIASHLQLIPKKAPSIPKPKWHAPWKLSRVISGHLGWVRCIAVE 181
            |                              ||...:|:...:|          |.|.:..:||.
 Worm   181 T------------------------------KKRAGVPEEPTNA----------HYGVIFTVAVS 205

  Fly   182 PGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEYN 246
            |..::.|:|..|:|:|||:..|.:....|:||...:..:....|...|:|..:||.||.||::..
 Worm   206 PDQKFIASGGFDQVVKIWNFDSLEHIKDLSGHRGPIFSLTFQLKTNNLYSASQDRSVKMWDIDQL 270

  Fly   247 KVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHTLTGHTNTVA-SVVAQATN 310
            .::...:||...|..:.:.....|....|||.:||:|.:..::.: ..:|..|.|: ..||....
 Worm   271 GLVDTMYGHQDGVQQIGVLSKQRVATVGGRDRSARLWKVEDESQL-MFSGLQNCVSLDCVAMINE 334

  Fly   311 PQIITGSHDSTVRLWDLAAGKSV-------CTLTNHKKSVRSIVLHPSLYMFASASPD-NIKQWR 367
            ....|||.|.::.||.....:::       .|.....:.:.::.:.|...:.||.|.: .:|.|:
 Worm   335 EHFATGSADGSIALWSFWKKRALHVRKQAHGTQNGSGRWIVALAVLPYSDLLASGSNEGELKLWK 399

  Fly   368 CPEG------KFVQNISGHTSIVNCMAANSEGVLVSGG-DNGTMFFWDWRTGYNFQRFQAPVQP- 424
            ..|.      .|..:|.|..:.:| .|.|.:.::|..| ::....:|..|...|    |..:.| 
 Worm   400 ISENFRQLTPFFSYSIPGFINSIN-FAPNGKSIVVGAGKEHKDGRWWVDREARN----QVVILPI 459

  Fly   425 ----GSMDSEAGIFAMCFDQSGSRLITAEADKTIKVYKEDDEASEESHPI 470
                ||.:::..|    .|::.|..::..:.......:..||:.||...:
 Worm   460 KYTDGSDNNDVTI----GDKTASGTVSGASAGGGGGIESGDESEEEEEEL 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tango4NP_572778.1 WD40 <161..458 CDD:225201 72/317 (23%)
WD40 164..458 CDD:238121 72/314 (23%)
WD40 repeat 177..212 CDD:293791 12/34 (35%)
WD40 repeat 218..254 CDD:293791 9/35 (26%)
WD40 repeat 259..295 CDD:293791 8/35 (23%)
WD40 repeat 302..337 CDD:293791 9/42 (21%)
WD40 repeat 343..378 CDD:293791 8/41 (20%)
WD40 repeat 386..426 CDD:293791 9/45 (20%)
WD40 repeat 433..457 CDD:293791 3/23 (13%)
T02H6.1NP_872030.2 WD40 132..435 CDD:238121 76/347 (22%)
WD40 repeat 145..194 CDD:293791 12/81 (15%)
WD40 repeat 200..236 CDD:293791 12/35 (34%)
WD40 repeat 241..277 CDD:293791 9/35 (26%)
WD40 repeat 284..318 CDD:293791 7/34 (21%)
WD40 repeat 326..363 CDD:293791 8/36 (22%)
WD40 repeat 374..412 CDD:293791 7/37 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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