DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tango4 and Pwp2

DIOPT Version :9

Sequence 1:NP_572778.1 Gene:Tango4 / 32168 FlyBaseID:FBgn0030365 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_083822.1 Gene:Pwp2 / 110816 MGIID:1341200 Length:919 Species:Mus musculus


Alignment Length:532 Identity:121/532 - (22%)
Similarity:193/532 - (36%) Gaps:93/532 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KHSVHTLIFRSLKRTHDLFVSNQGNLPEIDERLEKLRRSIKAKDGYGLVLDKVAKIGEARKASGA 72
            |.|||::.|....|.   ||..:||:.::.....| :|...|     .|||| ...|        
Mouse    96 KGSVHSVSFSPDGRK---FVVTKGNIAQMYHAPGK-KREFNA-----FVLDK-TYFG-------- 142

  Fly    73 QTPGDKTLAI--TDGSATDAASGAGSLVKYNAGARPAEKTAPLVTGTHTSLVRASLANSNA---- 131
              |.|:|..|  ||.|..... |:..:..:..||...:.........|...:.|....||:    
Mouse   143 --PYDETTCIDWTDDSKCFVV-GSKDMSTWVFGAERWDNLIYYALSGHKDAIVACFFESNSLDLY 204

  Fly   132 DMSANGAIASHLQLIPKKAPSIPKPK-WHA----------------------------PWKLSRV 167
            .:|.:||:.......|.:...:..|: |.|                            |.:..||
Mouse   205 SLSQDGALCVWQCDTPPEGLRLKAPRGWKADILQREKEEEEEDEEEGDRETTIRGKTTPAEQERV 269

  Fly   168 --------------ISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVR 218
                          ..|....:...|.........||....:..:.:|....|..||:.....|.
Mouse   270 GKVKYSRLAKYFLNKEGDFNNLTSAAYHKKTHLLVTGFASGIFHLHELPEFNLIHSLSISDQRVA 334

  Fly   219 GVAVSTKHPYL-FSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARI 282
            .||:::...:: |.|....|:..|:.:....:....||.:::.:||..|....:.|.|.|...::
Mouse   335 SVAINSSGDWIAFGCSGMGQLLVWEWQSESYVLKQQGHFNSMVALAYSPDGQYIVTGGDDGKVKV 399

  Fly   283 WDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIV 347
            |:..:.....|||.|::.|..|....|...|:|.|.|.|||.:||...::..|.|:.:.:..|.|
Mouse   400 WNTLSGFCFVTLTEHSSGVTGVTFTTTGHVIVTSSLDGTVRAFDLHRYRNFRTFTSPRPTQFSCV 464

  Fly   348 LHPSLYMFASASPDN---IKQWRCPEGKFVQNISGHTSIVNCMAAN-SEGVLVSGGDNGTMFFWD 408
            ...|.....||...:   |..|....|:.:..:|||...|:.:..| .:.:|.|...:.|:..||
Mouse   465 AVDSSGEIVSAGAQDSFEIFVWSMQTGRLLDVLSGHEGPVSGLCFNPMKSILASASWDKTVRLWD 529

  Fly   409 ----WRTGYNFQRFQAPVQPGSMDSEAGIFAMCFDQSGSRLITAEADKTIKVYKEDDEASEESHP 469
                |||....          ::.|:|  .|:.|...|:.|..|..:..|..:  |.|.:.:...
Mouse   530 MFDSWRTKETL----------TLTSDA--LAVTFRPDGAELAVATLNSQITFW--DPENAVQVGS 580

  Fly   470 INWRPDLLKRRK 481
            |..|.||...||
Mouse   581 IEGRHDLKTGRK 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tango4NP_572778.1 WD40 <161..458 CDD:225201 74/319 (23%)
WD40 164..458 CDD:238121 73/316 (23%)
WD40 repeat 177..212 CDD:293791 7/34 (21%)
WD40 repeat 218..254 CDD:293791 6/36 (17%)
WD40 repeat 259..295 CDD:293791 8/35 (23%)
WD40 repeat 302..337 CDD:293791 12/34 (35%)
WD40 repeat 343..378 CDD:293791 8/37 (22%)
WD40 repeat 386..426 CDD:293791 9/44 (20%)
WD40 repeat 433..457 CDD:293791 6/23 (26%)
Pwp2NP_083822.1 WD 1 12..50
WD40 repeat 17..51 CDD:293791
WD40 20..401 CDD:295369 65/325 (20%)
WD 2 53..93
WD40 58..469 CDD:225201 86/393 (22%)
WD40 repeat 59..93 CDD:293791
WD 3 94..132 12/39 (31%)
WD40 repeat 101..142 CDD:293791 13/50 (26%)
WD 4 142..181 11/49 (22%)
WD40 repeat 148..186 CDD:293791 7/38 (18%)
WD 5 186..225 8/38 (21%)
WD40 repeat 191..258 CDD:293791 10/66 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 238..266 1/27 (4%)
WD40 <277..643 CDD:225201 79/330 (24%)
WD 6 286..325 6/38 (16%)
WD40 repeat 292..327 CDD:293791 6/34 (18%)
WD40 322..629 CDD:238121 74/285 (26%)
WD 7 328..368 7/39 (18%)
WD40 repeat 333..371 CDD:293791 7/37 (19%)
WD 8 371..410 9/38 (24%)
WD40 repeat 377..413 CDD:293791 9/35 (26%)
WD 9 413..452 13/38 (34%)
WD40 repeat 418..454 CDD:293791 13/35 (37%)
WD 10 456..498 8/41 (20%)
WD40 repeat 462..498 CDD:293791 8/35 (23%)
WD 11 499..538 12/38 (32%)
WD40 repeat 504..540 CDD:293791 10/35 (29%)
WD 12 541..580 10/42 (24%)
WD40 repeat 546..601 CDD:293791 15/51 (29%)
WD 13 603..642
WD40 repeat 608..632 CDD:293791
WD 14 700..740
Utp12 771..873 CDD:281932
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 885..919
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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