DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tango4 and wdfy3

DIOPT Version :9

Sequence 1:NP_572778.1 Gene:Tango4 / 32168 FlyBaseID:FBgn0030365 Length:482 Species:Drosophila melanogaster
Sequence 2:XP_002937925.2 Gene:wdfy3 / 100496744 XenbaseID:XB-GENE-1005846 Length:3509 Species:Xenopus tropicalis


Alignment Length:339 Identity:72/339 - (21%)
Similarity:124/339 - (36%) Gaps:62/339 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 HDLFVSNQGNLPEIDERLEKLRRSIKAKDGYGLVLDKVAKIGEARKASGAQTPGDKT-LAITDGS 86
            |.||...|.::..|::.| |...:|...:.:|.:..::.|.....|....:..||.| :::..|:
 Frog  2914 HHLFYEGQVDIYNINDPL-KETATIGFINNFGQIPKQLFKKPHPPKRVRGRINGDLTSMSLPVGT 2977

  Fly    87 ATD-------------------AASGAGSLVKYNAGARPAEKTAPLVTGTHTSLVRASLANSNAD 132
            |.|                   .....|.:|..:.|....|:...|:......    :.|...||
 Frog  2978 ACDKIFFHHLDNLRPSLAPVKELKEPVGQIVCTDKGILAVEQNKVLIPPAWNK----TFAWGYAD 3038

  Fly   133 MSAN-GAIASHLQLIPKKAPSIPKPKWHAPWKLSRVISGHLGWVRCIAVEPGNEWFATGAGDRVI 196
            :|.. |...|...::..:..|    :|              |.:.| .:.|..:...||....||
 Frog  3039 LSCRLGTYESDKAVVVYECLS----EW--------------GQILC-TICPNPKMVITGGTSTVI 3084

  Fly   197 KIWDLASGK-------LKLSLTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYHG 254
            .:|:..:.|       ||.:|.||..||..:..|..:..:.|...||....|||.....:....|
 Frog  3085 CVWEAGTSKEKAKSLNLKQALIGHTDTVTCLTASLAYHIVVSGSRDRTCIIWDLNKLAFVTQLRG 3149

  Fly   255 HLSAVYSLALHP-TIDVLATSGRDSTARIWDMRTK--ANVHTLTGHTNTVASVVAQATNP----- 311
            |.:.|.:|.::. |.|:::.:|  :...:|.:...  .:|:|..|.:..:........|.     
 Frog  3150 HRAPVSALCINELTGDIVSCAG--TYIHVWSINGNPIVSVNTFIGRSQQILCCCVSEMNEWDTQN 3212

  Fly   312 QIITGSHDSTVRLW 325
            .|:||..|..||.|
 Frog  3213 VIVTGHSDGVVRFW 3226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tango4NP_572778.1 WD40 <161..458 CDD:225201 42/180 (23%)
WD40 164..458 CDD:238121 42/177 (24%)
WD40 repeat 177..212 CDD:293791 11/41 (27%)
WD40 repeat 218..254 CDD:293791 7/35 (20%)
WD40 repeat 259..295 CDD:293791 8/38 (21%)
WD40 repeat 302..337 CDD:293791 8/29 (28%)
WD40 repeat 343..378 CDD:293791
WD40 repeat 386..426 CDD:293791
WD40 repeat 433..457 CDD:293791
wdfy3XP_002937925.2 PH_BEACH 2516..2639 CDD:275391
Beach 2678..2958 CDD:366934 10/44 (23%)
WD40 3066..>3228 CDD:392136 41/164 (25%)
WD40 repeat 3066..3107 CDD:293791 11/41 (27%)
WD40 repeat 3113..3149 CDD:293791 7/35 (20%)
WD40 repeat 3154..3191 CDD:293791 8/38 (21%)
WD40 repeat 3198..3233 CDD:293791 8/29 (28%)
FYVE_WDFY3 3433..3497 CDD:277259
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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