Protein Alignment Lsm12a and LSM12

DIOPT Version :10

• Sequence 1: NP_572777.2
• Gene: Lsm12a / 32167
• FlyBaseID: FBgn0030364
• Length: 217
• Species: Drosophila melanogaster
• Sequence 2: NP_011989.1
• Gene: LSM12 / 856521
• SGDID: S000001163
• Length: 187
• Species: Saccharomyces cerevisiae
• Alignment Length: 171
• Identity: 40/171 - (23%)
• Similarity: 87/171 - (50%)
• Gaps: 14/171 - (8%)

  Fly    17 SIGSTVVCTTCFNEEVEGEVLAFDHNTKMLILKCRSKSTEELSDIYAMNLSLCSNVQVI--KECN 79
            ::|..:..|...:...||.:.:|:.:...|.:: .:|..:...:...:..:...:::||  |...
Yeast     8 TLGFRIKVTNVLDVVTEGRLYSFNSSNNTLTIQ-TTKKNQSPQNFKVIKCTFIKHLEVIGDKPSF 71

  Fly    80 GNFD----DPQKLNLEQVKMRLRKTV--ERRQDYLKSKNADVSPEAQELYRAIAKQYGYNEVSWQ 138
            .:|.    .|..:|:|:|:..|:::|  .::::.|:.|.  ||.|.|.::..|.|..|  :..|.
Yeast    72 NSFKKQQIKPSYVNVERVEKLLKESVIASKKKELLRGKG--VSAEGQFIFDQIFKTIG--DTKWV 132

  Fly   139 GLNIQILNEVTISPPYRVDNV-VSSSNNETSCNYIKRIIKQ 178
            ..:|.||::|.:.|||:|::: |....:..|...|:||:::
Yeast   133 AKDIIILDDVKVQPPYKVEDIKVLHEGSNQSITLIQRIVER 173

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lsm12a	NP_572777.2	LSm12_N	14..73	CDD:212482	7/55 (13%)
		AD	84..175	CDD:214962	27/93 (29%)
LSM12	NP_011989.1	AD	80..170	CDD:214962	27/93 (29%)