Protein Alignment Lsm12a and lsm12b

DIOPT Version :10

• Sequence 1: NP_572777.2
• Gene: Lsm12a / 32167
• FlyBaseID: FBgn0030364
• Length: 217
• Species: Drosophila melanogaster
• Sequence 2: NP_998313.1
• Gene: lsm12b / 406422
• ZFINID: ZDB-GENE-040426-2164
• Length: 196
• Species: Danio rerio
• Alignment Length: 199
• Identity: 68/199 - (34%)
• Similarity: 106/199 - (53%)
• Gaps: 16/199 - (8%)

  Fly    16 FSIGSTVVCTTCFNEEVEGEVLAFDHNTKMLILKCRSKSTE-ELSDIYAMNLSLCSNVQVIKECN 79
            ||:||.|.|.||..:.::|||:|||:.:|||.|||.|.|.: .|||:..:||:..|.|.:|   |
Zfish    10 FSVGSHVSCLTCLGQRLQGEVVAFDYPSKMLTLKCPSSSGKPNLSDVILINLAYVSEVDII---N 71

  Fly    80 GNFDDP---QKLNLEQVKMRLRKTVERRQDYLKSKNADVSPEAQELYRAIAKQYGYNEVSWQGLN 141
            ...:.|   ..||:.::..|.|...|.:.....:.:|.||.|.|:|::.|.|.  ..:..||..|
Zfish    72 DRTETPPPLASLNISKLANRARTEKEDKLSQAYAISAGVSIEGQQLFQTIHKT--IKDCKWQEKN 134

  Fly   142 IQILNEVTISPPYRVDNVVSSSNNETSCNYIKRIIKQFFNTRPSPVPESGAAASTSSPSVSPTSS 206
            |.::::|.|||||:|:|......:..|  :|::|:::.|..     .||......|....:...|
Zfish   135 IIVMDDVVISPPYQVENCKGKEGSALS--HIRKIVEKHFRD-----VESQKTMQRSQAQQTQKDS 192

  Fly   207 SLAS 210
            ||:|
Zfish   193 SLSS 196

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lsm12a	NP_572777.2	LSm12_N	14..73	CDD:212482	28/57 (49%)
		AD	84..175	CDD:214962	28/93 (30%)
lsm12b	NP_998313.1	LSm12_N	8..68	CDD:212482	28/57 (49%)
		AD	79..166	CDD:214962	27/90 (30%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	174..196		6/21 (29%)