Protein Alignment Lsm12a and lsm12

DIOPT Version :10

• Sequence 1: NP_572777.2
• Gene: Lsm12a / 32167
• FlyBaseID: FBgn0030364
• Length: 217
• Species: Drosophila melanogaster
• Sequence 2: XP_012827051.1
• Gene: lsm12 / 394627
• XenbaseID: XB-GENE-5780031
• Length: 194
• Species: Xenopus tropicalis
• Alignment Length: 190
• Identity: 65/190 - (34%)
• Similarity: 98/190 - (51%)
• Gaps: 10/190 - (5%)

  Fly    16 FSIGSTVVCTTCFNEEVEGEVLAFDHNTKMLILKCRSKSTE-ELSDIYAMNLSLCSNVQVIKECN 79
            |:||:.|.|.||....::|||:|||:.:|||.|||.|.|.: ..:||..:||...|:|:||.|..
 Frog     8 FAIGAYVSCRTCQETRLQGEVVAFDYPSKMLALKCPSSSGKPNHADILLLNLDYVSDVEVINERT 72

  Fly    80 GNFDDPQKLNLEQVKMRLRKTVERRQDYLKSKNADVSPEAQELYRAIAKQYGYNEVSWQGLNIQI 144
            ........||:.::..|.|...|.:.....:.:|.||.:.|:|::.|.|.  ..:..||..||.:
 Frog    73 QTPPPLASLNITKLASRARLEKEEKLSQAYAISAGVSLDGQQLFQTIHKT--IKDCKWQEKNIVV 135

  Fly   145 LNEVTISPPYRVDNVVSSSNNETSCNYIKRIIKQFFN------TRPSPVPESGAAASTSS 198
            :.||.|||||:|:| .........|:..|.:.|.|.:      .:.:|..:|....||||
 Frog   136 MEEVVISPPYQVEN-CKGKEGRALCHVCKIVEKHFIDMENQKGVQRNPAQQSQKETSTSS 194

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lsm12a	NP_572777.2	LSm12_N	14..73	CDD:212482	26/57 (46%)
		AD	84..175	CDD:214962	27/90 (30%)
lsm12	XP_012827051.1	LSm12_N	6..66	CDD:212482	26/57 (46%)
		AD	77..164	CDD:214962	26/89 (29%)