Protein Alignment Lsm12a and M142.5

DIOPT Version :10

• Sequence 1: NP_572777.2
• Gene: Lsm12a / 32167
• FlyBaseID: FBgn0030364
• Length: 217
• Species: Drosophila melanogaster
• Sequence 2: NP_001360483.1
• Gene: M142.5 / 176523
• WormBaseID: WBGene00010922
• Length: 211
• Species: Caenorhabditis elegans
• Alignment Length: 215
• Identity: 47/215 - (21%)
• Similarity: 87/215 - (40%)
• Gaps: 37/215 - (17%)

  Fly     1 MAAAAASAVNAVNDCFSIGSTVVCTTCFNEEVEGEVLAFDHNTKMLILKCRSK------------ 53
            ||:...:|.|.     :||:.|...|.......|.|::||...|..:|...:|
 Worm     1 MASCNLTASNV-----AIGACVEIETTNGLSARGVVISFDTTRKFQVLVLDTKEMAINKPMIRIF 60

  Fly    54 STEELSDIYAMNLSLCSNVQVIKECNGNFDDPQKLNLEQVKMRLRKTV-ERRQDYLKSKNADVSP 117
            ::|.|.:|..::.:|..:.:..:.....|.....:|..:...||.||: |...:.:||  ..:|.
 Worm    61 NSEHLKNIKVLSEALEESEKFARAKTEQFAQNNPVNGTRTTERLDKTLGELTPNLMKS--PAISI 123

  Fly   118 EAQELYRAIAKQYGYNEVSWQGLNIQILNEVTISPPYRVDNVV--------SSSNNETSCNYIKR 174
            ..|:.|..:.:.  ..:..|.|.:|::|..|.:..||.|.:|.        ..|..|::...:::
 Worm   124 RGQQAYLQLKRT--IPDTCWCGEDIRVLGLVLVHKPYEVSDVTKDAKATGFDESRAESAVLQVQK 186

  Fly   175 IIKQFFNTRPSPVPESGAAA 194
            |:.:       |:.|..|.|
 Worm   187 ILSK-------PMTEYTARA 199

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lsm12a	NP_572777.2	LSm12_N	14..73	CDD:212482	15/70 (21%)
		AD	84..175	CDD:214962	22/99 (22%)
M142.5	NP_001360483.1	AD	91..187	CDD:214962	22/99 (22%)