DRSC/TRiP Functional Genomics Resources

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Protein Alignment Chrac-16 and NF-YC4

DIOPT Version :9

Sequence 1:NP_001285148.1 Gene:Chrac-16 / 32166 FlyBaseID:FBgn0043001 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_001032130.1 Gene:NF-YC4 / 836466 AraportID:AT5G63470 Length:250 Species:Arabidopsis thaliana


Alignment Length:82 Identity:25/82 - (30%)
Similarity:43/82 - (52%) Gaps:5/82 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LPLSRVRTIMKSSMDTGLITNEVLFLMTKCTELFVRHLA--GAAYTEEFGQRPGEALKYEHLSQV 82
            |||:|::.|||:..|..:|:.|...|..|..|||:..|.  ...:.||..:|   .|:...::..
plant    79 LPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRR---TLQKNDIAAA 140

  Fly    83 VNKNKNLEFLLQIVPQK 99
            :.:....:||:.|||::
plant   141 ITRTDIFDFLVDIVPRE 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Chrac-16NP_001285148.1 CBFD_NFYB_HMF 19..83 CDD:366318 20/64 (31%)
NF-YC4NP_001032130.1 HAP5 <60..217 CDD:227533 25/82 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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