DRSC/TRiP Functional Genomics Resources

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Protein Alignment Chrac-16 and NF-YC5

DIOPT Version :9

Sequence 1:NP_001285148.1 Gene:Chrac-16 / 32166 FlyBaseID:FBgn0043001 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_199860.1 Gene:NF-YC5 / 835117 AraportID:AT5G50490 Length:186 Species:Arabidopsis thaliana


Alignment Length:80 Identity:22/80 - (27%)
Similarity:40/80 - (50%) Gaps:5/80 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 PLSRVRTIMKSSMDTGLITNEVLFLMTKCTELFVRHLAGAA--YTEEFGQRPGEALKYEHLSQVV 83
            |:||::.|||...|..:|..|...|::|..|:||..|...:  :.:|..:.   .::...:..||
plant    38 PISRIKRIMKFDPDVSMIAAEAPNLLSKACEMFVMDLTMRSWLHAQESNRL---TIRKSDVDAVV 99

  Fly    84 NKNKNLEFLLQIVPQ 98
            ::....:||...||:
plant   100 SQTVIFDFLRDDVPK 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Chrac-16NP_001285148.1 CBFD_NFYB_HMF 19..83 CDD:366318 16/63 (25%)
NF-YC5NP_199860.1 CBFD_NFYB_HMF 36..99 CDD:279185 16/63 (25%)
Periplasmic_Binding_Protein_Type_2 <111..>152 CDD:304360 2/4 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1622159at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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