DRSC/TRiP Functional Genomics Resources

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Protein Alignment regucalcin and smp-30

DIOPT Version :9

Sequence 1:NP_727588.2 Gene:regucalcin / 32165 FlyBaseID:FBgn0030362 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001262580.1 Gene:smp-30 / 41786 FlyBaseID:FBgn0038257 Length:306 Species:Drosophila melanogaster


Alignment Length:303 Identity:218/303 - (71%)
Similarity:249/303 - (82%) Gaps:0/303 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 MSYKVEPLPDSYAGLGEGPHWDVARQSLYYVDLEAGSLLRYDYAQNKVYKTKIEGETLAGFVLPV 81
            ||||||.:|||||.|||||||||.||||||||||:..:.|||:.|||||:.|||||..|.|:|||
  Fly     4 MSYKVEAVPDSYAALGEGPHWDVDRQSLYYVDLESAGINRYDFKQNKVYRAKIEGEIFASFILPV 68

  Fly    82 EGRPQEFAVGCGRRVVIVNWDGVSPSAKVVRTLFEVQPLMEKNRLNDAKVDPRGRFFGGTMRYIG 146
            |.:|||||||||.|.|||.|||||..|||.||||||||.:::|||||||.||.|||:||||...|
  Fly    69 ENKPQEFAVGCGLRTVIVQWDGVSAVAKVTRTLFEVQPDLKENRLNDAKTDPNGRFYGGTMADSG 133

  Fly   147 DEFEFRHGELYRWEAGGQVSVIKGDVGISNGLAWDEKAKKFYYIDTTDYEVKSYDYDFETGVASN 211
            |.|....||||.|:||||.:.|:..||||||||||.||||||:|||.::||.:|||:..||..||
  Fly   134 DIFTQWKGELYSWQAGGQPNAIRSKVGISNGLAWDVKAKKFYFIDTNNHEVLAYDYNQSTGAVSN 198

  Fly   212 PKVIFNLRKNSPKDHLLPDGLTIDTEGNLYVATFNGATIYKVNPNTGKILLEIKFPTKQITSAAF 276
            |||||:|||..|:..|.|||:|:||:||:|||||||.|::||||:|||||||||.||.||||.||
  Fly   199 PKVIFDLRKIRPEGPLFPDGMTVDTDGNIYVATFNGGTVFKVNPSTGKILLEIKIPTTQITSVAF 263

  Fly   277 GGPNLDILYVTTAAKFDQPAPAGTTYKVTGLNATGYPGVNLKV 319
            |||||||||||||.|||||.|||||::||||||.||.|||||:
  Fly   264 GGPNLDILYVTTANKFDQPKPAGTTFQVTGLNAKGYAGVNLKI 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
regucalcinNP_727588.2 SGL 31..290 CDD:285626 183/258 (71%)
NHL <229..302 CDD:302697 59/72 (82%)
NHL repeat 229..259 CDD:271320 21/29 (72%)
smp-30NP_001262580.1 SGL 18..277 CDD:285626 183/258 (71%)
NHL 168..>248 CDD:302697 52/79 (66%)
NHL repeat 168..208 CDD:271320 26/39 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442195
Domainoid 1 1.000 154 1.000 Domainoid score I4216
eggNOG 1 0.900 - - E1_COG3386
Homologene 1 1.000 - - H3437
Inparanoid 1 1.050 168 1.000 Inparanoid score I4127
Isobase 1 0.950 - 0 Normalized mean entropy S4948
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D101038at33392
OrthoFinder 1 1.000 - - FOG0003598
OrthoInspector 1 1.000 - - otm26199
orthoMCL 1 0.900 - - OOG6_101744
Panther 1 1.100 - - P PTHR10907
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2337
SonicParanoid 1 1.000 - - X2470
1413.780

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