DRSC/TRiP Functional Genomics Resources

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Protein Alignment regucalcin and yellow-d2

DIOPT Version :9

Sequence 1:NP_727588.2 Gene:regucalcin / 32165 FlyBaseID:FBgn0030362 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_611788.1 Gene:yellow-d2 / 37704 FlyBaseID:FBgn0034856 Length:412 Species:Drosophila melanogaster


Alignment Length:196 Identity:41/196 - (20%)
Similarity:66/196 - (33%) Gaps:56/196 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GLTMSYKVEP-------LPDSYAGLGEGPHWDVARQSLYYVDLEAGSLLRYDYAQNKVYKTKIEG 71
            |||..|:.:.       :.||    ||..........||.:|||:|.:........::||     
  Fly   120 GLTSVYRTQIDECGRMWILDS----GEIDFIQHCPPQLYAIDLESGKVAHQYKMPKRLYK----- 175

  Fly    72 ETLAGFVLP-VEGRPQEFAVGCGRRVVIVNWDGVSPSAKVVRTLFEVQPLMEKNRLNDAKVDPRG 135
            |.::.||.| ||..|....||.......:. ||:        .:::| ...:..|:.:....|..
  Fly   176 EGVSRFVTPTVELDPHNCDVGFVYMADSIG-DGI--------VVYDV-AAQQSWRIENKFTYPHP 230

  Fly   136 RFFGGTMRYIGDEFE---------------------FRHGELYRWEAGGQVSVIKGDVGISNGLA 179
            .|  ||....|:.|:                     :.|.....|:....:.|      ::||..
  Fly   231 DF--GTFTIAGESFQLWDGTVSTTLTPHGLGGRRMMYFHSLSSEWQMAIPLDV------VNNGSN 287

  Fly   180 W 180
            |
  Fly   288 W 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
regucalcinNP_727588.2 SGL 31..290 CDD:285626 35/172 (20%)
NHL <229..302 CDD:302697
NHL repeat 229..259 CDD:271320
yellow-d2NP_611788.1 MRJP 122..411 CDD:281074 39/194 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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