DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment regucalcin and y

DIOPT Version :9

Sequence 1:NP_727588.2 Gene:regucalcin / 32165 FlyBaseID:FBgn0030362 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_476792.1 Gene:y / 30980 FlyBaseID:FBgn0004034 Length:541 Species:Drosophila melanogaster


Alignment Length:380 Identity:76/380 - (20%)
Similarity:127/380 - (33%) Gaps:110/380 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 AVCLFGLTMSYKVE--PLPDSYAGLGEGPHWDVARQSL-----------YYVDLEAGSLLRYDYA 60
            ||.:|.||...::.  .||    |:...|:..:|..::           |:.|.....|:.|.:.
  Fly   153 AVNVFDLTTDTRIRRYELP----GVDTNPNTFIANIAVDIGKNCDDAYAYFADELGYGLIAYSWE 213

  Fly    61 QNKVYKTKIEGETLAGFVLPVEGRPQEFAVG-----------CGRRVVIVNWDG-----VSPSAK 109
            .||.::.......   |..|:.|   :|.|.           .|..:..:..||     .||.|.
  Fly   214 LNKSWRFSAHSYF---FPDPLRG---DFNVAGINFQWGEEGIFGMSLSPIRSDGYRTLYFSPLAS 272

  Fly   110 VVRTLFEVQPLMEKNRLNDA-----KVDPRGRFFGGTMRYIGDEFEFRHG-ELYR---------W 159
            ..:.....:.|.::.|..|:     .:|.||.....|.|.:.|:     | ||:.         |
  Fly   273 HRQFAVSTRILRDETRTEDSYHDFVALDERGPNSHTTSRVMSDD-----GIELFNLIDQNAVGCW 332

  Fly   160 EAGGQVS------VIKGDVGI---------SNGLAW--DEKAKKFYY--IDTTDYEVKSYDYDFE 205
            .:....|      |.:.|||:         .|...|  .::...|..  :|.:|...:.|.....
  Fly   333 HSSMPYSPQFHGIVDRDDVGLVFPADVKIDENKNVWVLSDRMPVFLLSDLDYSDTNFRIYTAPLA 397

  Fly   206 TGVASNPKVIFNLRKNS---------PKDHLLPDGLTIDTEGNLYVATFNGATIYKVNP------ 255
            |.:.:   .:.:||.|:         ||..:||.|..:.|:....|......|.:..:|      
  Fly   398 TLIEN---TVCDLRNNAYGPPNTVSIPKQAVLPMGPPLYTKQYRPVLPQKPQTSWASSPPPPSRT 459

  Fly   256 ----NTGKILLEIKFPTKQITSAAFGGPNLDILYVTTAAKFDQPAPAGTTYKVTG 306
                |:|.::..|...|..:..|....|...|        |:|  ..|..|:.:|
  Fly   460 YLPANSGNVVSSISVSTNSVGPAGVEVPKAYI--------FNQ--HNGINYETSG 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
regucalcinNP_727588.2 SGL 31..290 CDD:285626 63/338 (19%)
NHL <229..302 CDD:302697 16/82 (20%)
NHL repeat 229..259 CDD:271320 7/39 (18%)
yNP_476792.1 MRJP 119..405 CDD:308585 52/269 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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