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Protein Alignment CG1492 and Ggt5

DIOPT Version :9

Sequence 1:	NP_001303553.1	Gene:	CG1492 / 32164	FlyBaseID:	FBgn0030361	Length:	592	Species:	Drosophila melanogaster
Sequence 2:	NP_062108.2	Gene:	Ggt5 / 29566	RGDID:	2684	Length:	572	Species:	Rattus norvegicus

Alignment Length:	630	Identity:	199/630 - (31%)
Similarity:	295/630 - (46%)	Gaps:	109/630 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly     3 IRIGLNSLISVVIVILVAVYIYRYPDGNAGKKKASRRPPNPEDPLPPSNSPLHRFSRAAICSDSD 67
            :.:|::  :.:.|::|..|..:.         :||.||              ..|:|||:.:||.
  Rat    12 VLLGVS--LGLAIIVLAVVLPHH---------QASCRP--------------DAFTRAAVAADSK 51

  Fly    68 VCSQLAKKVLENGGSAVDGALAALICNGLIGMQSMGIGGGMVMNVYVAKENKSYSILAREMAPLA 132
            :||.:.:.:|:..||.||.|:|||||.|::..||||:|||:|..:|.|...|...|.|||..|.:
  Rat    52 ICSDIGRVILQQQGSPVDAAIAALICTGVVNPQSMGLGGGVVFTIYNASTGKVEVINARETVPAS 116

  Fly   133 LRADNFSSFRDEQDFKR----------SGWSIAVPAELAGYAVAHQRFGRLKWKDLVLPTLELCR 187
                     .|::...:          :.| |.||.||.|||.||:|:|||.|..|..||:.|.|
  Rat   117 ---------HDQRLLDQCTNALPLCTGAQW-IGVPGELRGYAEAHRRYGRLPWAQLFQPTIALLR 171

  Fly   188 RGYRL--YKHQYDALILNQDMIRA---DSGLRRMFID-PDTGRF-----WPLGHLIRPAAQLCNT 241
            .|:|:  ...|:    ||...::.   .|.||::|.: .:|.|.     ||         .|.||
  Rat   172 EGFRVPPILSQF----LNTSFLQPCLNSSTLRQLFFNGTETLRSQDPLPWP---------ALANT 223

  Fly   242 YDRLANEGPLSFYRGSIADDLLADLKDAGSAITKEDLNQAHAKLSSAIVMPLDEYDLHLTPPPGS 306
            .:.:|.||....|.|.:...|:.|:...||.:|.:||.....|:...:.|.|..|.|:..|||..
  Rat   224 LETVAKEGAEVLYTGKLGQTLVEDIAWQGSQLTVQDLAAFRPKVVEPLEMALGNYTLYSPPPPAG 288

  Fly   307 GHVLGFIMNILKEFRAEFSRAGTMSP----RQIHLMVEAMKFGFVKRWQLDESASEELLSNLTSH 367
            |.:|.||:|:||.|  .||......|    ...|.:|||:||...:||:|.:..|...:.|::..
  Rat   289 GAILSFILNVLKGF--NFSAETVAGPEGKVNMYHHLVEALKFAVGQRWRLWDPYSHPGIQNISQD 351

  Fly   368 ELAKSVARQINH------THTFNRPEFYGASPGIQIRDEHGTAHTSVLHGND--AVSVTSSINFY 424
            .|.:::|:.|..      .|..:.   |..| |:: .:..||:|.||| |.|  ||:.||:||..
  Rat   352 LLRETLAQHIRQQIDGRGDHQLSH---YNLS-GVR-GNSMGTSHVSVL-GEDGSAVAATSTINTP 410

  Fly   425 FGSGRTGRRTGVIFNNAMSDFSIEQLKNYFDLPFVPG---TNGVAPAARPMSSMCPVIVTERATG 486
            ||:.....|||::.||.:.|.....         .||   |....|..:|.|||.|.|:.....|
  Rat   411 FGAMVYSPRTGILLNNELLDLCWRH---------KPGSTVTPPPVPGEQPPSSMVPSILINEVQG 466

  Fly   487 NVRLVVGAAGGTKIISALSPLLVRILWQEASIKAAIDASRIHHQMLPNVLLYEYGLRQSYVDSLA 551
            : :||:|.|||..||||::..:|..||...|:..||.|..:|.....:| .||....|.....|.
  Rat   467 S-KLVIGGAGGELIISAVTQAIVNKLWLGFSLTDAIAAPILHVNSKGHV-EYEPKFNQEVRKGLQ 529

  Fly   552 ERGHRCERYENRGSVICGIAQA----NDTIWVNSDFRKPGGVSGF 592
            :||.  .:.:::..|.....||    ...::..||.||.|..||:
  Rat   530 DRGQ--SQSQSQRPVFLNSVQAVFQEGPCVYAASDLRKAGKASGY 572

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.