DRSC/TRiP Functional Genomics Resources

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Protein Alignment fw and svep1

DIOPT Version :10

Sequence 1:NP_511136.2 Gene:fw / 32162 FlyBaseID:FBgn0001083 Length:1174 Species:Drosophila melanogaster
Sequence 2:NP_001429572.1 Gene:svep1 / 567357 ZFINID:ZDB-GENE-110726-1 Length:3615 Species:Danio rerio


Alignment Length:1111 Identity:294/1111 - (26%)
Similarity:418/1111 - (37%) Gaps:232/1111 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 CGPPAV------PLNAKVRTITVDSQIAEAHYECDAGYELFGPSAVKCDRRTGWDRDLPFCGVNV 116
            ||.|.|      .||.|:...|:.       |.|..||.|.|...::|:....|....|.| ..|
Zfish  1905 CGEPPVVDYAEYTLNGKIYRSTLS-------YTCIEGYRLQGAMELQCESSGEWTSPPPMC-ARV 1961

  Fly   117 AYRKP-------VNQSSYTRSGPASY-ANDG------------KPGNKNPDGQECSETQKEPSPW 161
            ...||       :...::|......| ..||            ..||...:..:|......|.| 
Zfish  1962 DCGKPPPLKDAVIKGDNFTLGSKIYYICKDGYTLLGAETQECLPSGNWTRNSSQCVPRSCGPPP- 2025

  Fly   162 WRVDLLTPQAVHVVRITTRGCCGHQPLQDLEI-------RVGNSSADLQRNPLCAWYPGTLDEG- 218
             :||...|..            |||...|:.|       ..||:: .|..|....|.|   .:| 
Zfish  2026 -QVDHALPDT------------GHQLFGDIAIYFCDDGYTAGNNT-KLFCNAQGVWAP---PDGF 2073

  Fly   219 ----VVKTFTCARPLVGQYVAIQLVGVEGSLSLCEV-----ETFTNDEFSVDRCLSPKIGVDTVV 274
                .:..| |.||....:..:..:......|..||     |.|..:.....:||   ||.:...
Zfish  2074 GIPHCIANF-CQRPPDLPHAILDSINKPKYASNTEVSYKCEEGFVLNTTGTLKCL---IGGEWTP 2134

  Fly   275 TTFSKTCYDFHITKGESFDKAQAICKQTGGDLVHDFRGATSSYILSELERRKSELKPQLVWIGAQ 339
            :.....|.....:|.||.:|........|...|..:......:|..|   :|...|....|.|..
Zfish  2135 SPSDIGCMPVRCSKPESIEKGYVSGNNYGFGAVIAYSCDKGYFIRGE---KKRICKASGEWGGVL 2196

  Fly   340 K--EPGITSRTWKWVNGDVVQKPTWGKDQPNN--YNGEQNCVVLDGGR-----------NWLW-- 387
            .  :|.......:..||.:     .|:.:.|:  ||.:......||.|           |..|  
Zfish  2197 PTCQPISCPSPPRLANGFI-----QGQIRKNSYVYNSKVTYACNDGYRLTGKPERTCMANKQWSN 2256

  Fly   388 -NDVGCNLDYLHFICQHSPLSCGSPDAQQNTTVMGKKFTLGEKIQYTCPKGHSLLGQTEREC--- 448
             |.:.|.|           |:|.:|...:|....|..|.:|.|:::.|.:|:.|:|.|...|   
Zfish  2257 SNSLVCVL-----------LTCPTPPDIKNGLYHGSTFEVGSKVEFVCNEGYELIGDTVWTCLKF 2310

  Fly   449 -----------------------------RLD---GT------------------------WSGS 457
                                         .||   ||                        |:.|
Zfish  2311 GNWDKSIIPRCSPVQCPEPPLEENHLVLRGLDSDSGTVELSCEEGYVLHGARTLRCTPSQEWNDS 2375

  Fly   458 SPTCKYVDCGSLPELKFGSIHMSEERTSFGVVATYSCHENYTLIGNENRTCAMDG-WSGKQPECL 521
            .|.||.|.||..||:.||.  .|:.::.||.|.||||.:.:||....:..|..:| ||...|:|:
Zfish  2376 FPVCKQVFCGPPPEVAFGD--PSDTQSYFGSVVTYSCMDGFTLRKEGSVHCQANGNWSKPYPQCI 2438

  Fly   522 VDWCPDPQPIAGGDVRFNDKRAGSTATYVCEPGYVLVGEAIISCGLGGEWSSKTPSCRFVDCGAP 586
            ...||.|:.|..|.|........|||.|.|:.||.::|.:.:.||..|:|....|.|..|.|.||
Zfish  2439 PVECPHPEDIPNGIVDVQGLMYLSTAVYSCKAGYDILGNSTVLCGQSGQWIGGIPVCHPVKCAAP 2503

  Fly   587 ARPNRGIAILLNGTTTVNSV-----VKYECDEDHWLDGQSELYCTREGKWSGEAPVCELVTCETP 646
            ..       :.||:...:.:     :.|.|...:.:.|...|.|...|:|..|||.|..:.|..|
Zfish  2504 KE-------IPNGSVRYSKLQFSQSITYFCQRGYRIQGPETLTCLENGQWDQEAPTCVPIYCSPP 2561

  Fly   647 SVPSGSFVIGYDYNVHSKIQYNCDPGHIMHGTPVLECLDSGEWSADAPYCEYIDCGTILPIPYG- 710
            ......||.|.|......|.|:|.||.::.|...|.|.|.| ||:..|.|...|||....|.:| 
Zfish  2562 KPIDNGFVEGRDRKFGVTIFYSCFPGFLLVGNNHLTCEDHG-WSSSEPKCVLADCGLPPHIDFGD 2625

  Fly   711 -------SHKY---------VTNTTYVGSEVVFSCSQSHKLSGVLKRTCLESAVWSDASPKCEEI 759
                   |.:|         |.|:...||.|.:.|...::::|.:...|.|...|:..:|.|...
Zfish  2626 YSKVQELSAEYDMVTSQQLPVDNSFLHGSLVKYHCHSGYEINGAIMLMCREDGTWNGTAPMCTPA 2690

  Fly   760 RCPEPKLAAHSLLSVTGNDRMYGRTLIRTSESSQNTAQTYKIGALAKYRCERGYKMVGEALATCT 824
            :|..|....:..:.||.:                      .:|:||:|.|..||::.|:.:..|.
Zfish  2691 QCEAPPSPENGSVMVTDS----------------------ALGSLAEYSCAEGYELNGQTIRQCI 2733

  Fly   825 DSGQWSGTIPECVYVECGAPEGINNGKVVLATNATYYGAAVLYECNVNFKLNGVSRRLCTEHGNW 889
            ...|||...|.|:.:.||.|.||.||:|:  ..:.::...:.|||:..|.|.||..|.|...|.|
Zfish  2734 SGQQWSDDAPRCLPISCGNPGGIANGEVI--GKSFHFKELIHYECHSGFVLEGVETRTCQVDGKW 2796

  Fly   890 SHEAPECVEVVCDTPNINENLIVEAGPRAVGSVATFKCAKGRIMMGNDTRVCQKNGKWTGKSPTC 954
            .::||.|.||.|..|.::::::|.......|....|.|..|.|::|..|.||..||.|....|.|
Zfish  2797 DNKAPLCKEVSCGRPVVSKDVLVRGDDHTFGKRLLFSCNLGFILLGAPTIVCLANGSWNEVPPKC 2861

  Fly   955 RPVDCGRPLAIENGRVIVVNDSTLYG--GSAEYHCIPNYNRIGQYLRKCTEDGAWSGKQPRCELA 1017
            .|.:||:|.:||||||    ..|.||  |...|.|...|...|.....|..||.|....|||::.
Zfish  2862 LPANCGQPPSIENGRV----TGTDYGYNGMVRYACDIGYVLTGNPTLICRADGLWDDPPPRCDII 2922

  Fly  1018 TAEGQE 1023
            |.:..|
Zfish  2923 TCDPPE 2928

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fwNP_511136.2 CCP 58..112 CDD:153056 17/59 (29%)
FTP 113..261 CDD:128870 36/184 (20%)
CLECT 281..403 CDD:153057 28/139 (20%)
PHA02927 <408..578 CDD:222943 64/229 (28%)
PHA02927 <508..696 CDD:222943 62/193 (32%)
PHA02639 643..>837 CDD:165022 56/210 (27%)
PHA02927 798..1014 CDD:222943 78/217 (36%)
svep1NP_001429572.1 None

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