DRSC/TRiP Functional Genomics Resources

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Protein Alignment fw and Cr1l

DIOPT Version :10

Sequence 1:NP_511136.2 Gene:fw / 32162 FlyBaseID:FBgn0001083 Length:1174 Species:Drosophila melanogaster
Sequence 2:XP_063128627.1 Gene:Cr1l / 54243 RGDID:2399 Length:565 Species:Rattus norvegicus


Alignment Length:602 Identity:140/602 - (23%)
Similarity:222/602 - (36%) Gaps:131/602 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   525 CPDP------QPIAGGDVRFNDKRAGSTATYVCEPGYVLVGEAIISCGLGGEWSSKTPSCRFVDC 583
            ||.|      :||...|.  :....|::..|.|.|||: ..:..|:|.:...|:|....|....|
  Rat    38 CPAPPLFPYAKPINPTDE--STFPVGTSLKYECRPGYI-KRQFSITCEVNSVWTSPQDVCIRKQC 99

  Fly   584 GAPARPNRGIAILLNGTTTVNSVVKYECDEDHWLDGQSELYC---TREGKWSGEAPVCELVTCE- 644
            ..|..|..|| :.:|......|.:.|.|:|.:.|.|.|...|   .:...|..|||:||.:.|| 
  Rat   100 ETPLDPQNGI-VHVNTDIRFGSSITYTCNEGYRLIGSSSAMCIISDQSVAWDAEAPICESIPCEI 163

  Fly   645 TPSVPSGSFVI--GYDYNVHSKIQYNCDPG------HIMHGTPVLECLDSGEWSADAPYCEYIDC 701
            .||:|:|.|..  ..|::....:.|.|:..      ..:.|.|.:.|                  
  Rat   164 PPSIPNGDFFSPNREDFHYGMVVTYQCNTDARGKKLFNLVGEPSIHC------------------ 210

  Fly   702 GTILPIPYGSHKYVTNTTYVGSEVVFSCSQSHKLSGVLKRTCLESAVWSDASPKCEEI-RCPEPK 765
                             |.:..:|                     .|||...|:|.|: :|..|.
  Rat   211 -----------------TSIDGQV---------------------GVWSGPPPQCIELNKCTPPH 237

  Fly   766 LAAHSLLSVTGNDRMYGRTLIRTSESSQNTAQTYKIGALAKYRCERGYKMVGEALATCTDSGQWS 830
            :  .:.:.|:.|..:                  :.:..:.::||:.|:.|.|::...|....:|.
  Rat   238 V--ENAVIVSKNKSL------------------FSLRDMVEFRCQDGFMMKGDSSVYCRSLNRWE 282

  Fly   831 GTIPECVYVE-CGAPEG-INNGKVVLATNATYYGAAVLYECNVNFKLNGVSRRLCTEHG---NWS 890
            ..:|.|..|: |||..| :.||.|.:..| ...||.|.:.||..::|.|.|...|...|   .|:
  Rat   283 PQLPSCFKVKSCGAFLGELPNGHVFVPQN-LQLGAKVTFVCNTGYQLKGNSSSHCVLDGVESIWN 346

  Fly   891 HEAPECVEVVCDTP----NINENLIVEAGPRAVGSVATFKCAKGRIMMGNDTRVCQKNGKWTGKS 951
            ...|.|.:|:|..|    ...:.|.::. ....|.....:|..|..:.|:....||.:..|....
  Rat   347 SSVPVCEQVICKLPQDMSGFQKGLQMKK-DYYYGDNVALECEDGYTLEGSSQSQCQSDASWDPPL 410

  Fly   952 PTC-RPVDCGRP---LAIENGRVIVVNDSTLYGGSAEYHCIPNYNRIGQYLRKCTEDGAWSGKQP 1012
            |.| ..|.|..|   ...:.|  :.:.....||.:....|...|...|....:|..|.:|....|
  Rat   411 PKCVSQVICKLPQDMSGFQKG--LQMKKDYYYGDNVALECEDGYTLEGSSQSQCQSDASWDPPLP 473

  Fly  1013 RCELATAEGQETSELGTGVGIGATVIVALLVIFGLIFLYRNKARPVKNTENVQAAE------TKD 1071
            :|     ..:..|.|..|:.||..|:: |.:||....:.:.|.|   |:.|.:..|      :|:
  Rat   474 KC-----VSRSNSGLIAGIFIGIIVLI-LFIIFSYWMIMKFKKR---NSTNEKCKEVGIYLNSKE 529

  Fly  1072 ERNAAVMSYSTLEANNR 1088
            :......|..|.:.|||
  Rat   530 DSCVQPQSLLTSQENNR 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fwNP_511136.2 CCP 58..112 CDD:153056
FTP 113..261 CDD:128870
CLECT 281..403 CDD:153057
PHA02927 <408..578 CDD:222943 16/58 (28%)
PHA02927 <508..696 CDD:222943 50/188 (27%)
PHA02639 643..>837 CDD:165022 33/203 (16%)
PHA02927 798..1014 CDD:222943 57/228 (25%)
Cr1lXP_063128627.1 None
Blue background indicates that the domain is not in the aligned region.

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