DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fw and rca2.1

DIOPT Version :10

Sequence 1:NP_511136.2 Gene:fw / 32162 FlyBaseID:FBgn0001083 Length:1174 Species:Drosophila melanogaster
Sequence 2:XP_005162222.1 Gene:rca2.1 / 541367 ZFINID:ZDB-GENE-050320-60 Length:415 Species:Danio rerio


Alignment Length:301 Identity:78/301 - (25%)
Similarity:120/301 - (39%) Gaps:41/301 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   400 ICQHSPLSCGSPDAQQNTTVMGKKFTLGEKIQYTCPKGHSLL-----GQTERECR-------LDG 452
            :|.|....|..|..:....|:...::.|:    |.|.|.:|.     |.|..:.|       ...
Zfish    18 MCTHVQGECTLPSFESRNVVLSGSYSPGQ----TLPDGSALTFECLSGHTPVDSRATKSITCTKS 78

  Fly   453 TWSGSSPTCKYVDCGSLPELKFGSIHMSEERTSFGVVATYSCHENYTLIGN--ENRTCAMDGWSG 515
            .|:....:||...|||.||:..|...:|  ...||......|:..|.|:|.  :.|.|...||.|
Zfish    79 QWTDLGLSCKKKSCGSPPEIVNGRYEIS--GILFGDTIKPICNTGYMLVGYGLDQRVCRDGGWDG 141

  Fly   516 KQPECLVDWCPDPQPIAGG---DVRFNDKRAGSTATYVCEPGYVLVGEAIISCGLGGEWSSKTPS 577
            :.|||.|..|..|..|..|   |............||.|..|:.|.|.:.:.|...|.:....|.
Zfish   142 RDPECEVVKCAAPPSIENGQLSDEPLESYEYSQVVTYRCNSGFSLSGSSNLHCSDDGTFKPDPPK 206

  Fly   578 CRFVD-CGAPARPNRGIAILLNGTT---TVNSVVKYECDEDHWLDGQSELYCTREGKWSGEAPVC 638
            |  :| |..|..|:   ||.:.|.:   .:...::|:|::.:.|.|..|:.| |.|.|..|.|.|
Zfish   207 C--LDGCPKPEIPH---AIRIGGRSPPYKIGHFIEYKCEDLYTLKGIKEIAC-RAGGWDPEPPKC 265

  Fly   639 ELVTCETPSVPSGSFVIGYDYNVH------SKIQYNCDPGH 673
             :..|..|:. .|:..:..:::..      .|:.:.|..|:
Zfish   266 -IEPCRVPNF-GGNVTLREEFSSKDLFPHGDKVAFKCKSGY 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fwNP_511136.2 CCP 58..112 CDD:153056
FTP 113..261 CDD:128870
CLECT 281..403 CDD:153057 1/2 (50%)
PHA02927 <408..578 CDD:222943 50/186 (27%)
PHA02927 <508..696 CDD:222943 48/179 (27%)
PHA02639 643..>837 CDD:165022 6/37 (16%)
PHA02927 798..1014 CDD:222943
rca2.1XP_005162222.1 PHA02927 15..266 CDD:222943 72/260 (28%)
CCP <285..330 CDD:153056 3/20 (15%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.