DRSC/TRiP Functional Genomics Resources

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Protein Alignment fw and RGD1564614

DIOPT Version :9

Sequence 1:NP_001285146.1 Gene:fw / 32162 FlyBaseID:FBgn0001083 Length:1174 Species:Drosophila melanogaster
Sequence 2:NP_001128264.1 Gene:RGD1564614 / 498241 RGDID:1564614 Length:699 Species:Rattus norvegicus


Alignment Length:699 Identity:173/699 - (24%)
Similarity:276/699 - (39%) Gaps:145/699 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   372 GEQNCVVLDGGRNWLWNDVGCNLDYLHFICQHSPLSCGSPDAQQN--TTVMGKKFTLGEKIQYTC 434
            ||:.||                   ||::              :|  :..:.:||...:.::..|
  Rat    23 GEEECV-------------------LHYV--------------ENGYSLFLERKFVQDQSVKVNC 54

  Fly   435 PKGHSL-LGQTERECRLDGTWSGSSPTCKYVDCGSLPELKFGSIHMSEERTSFGV--VATYSCHE 496
            .||.:| .||....|...| |: ..|.|...:..|..:::..:...||...::.|  ...|.|.:
  Rat    55 YKGFNLPNGQDTITCTESG-WT-PQPICIPSETCSKSDIEIDNGFFSESDLTYAVNRKTRYVCKQ 117

  Fly   497 NYTLIGNENR---TCAMDGWSGKQPECLVDWCPDPQPIAGGDVRFNDKRAGSTAT---------Y 549
            .||....|..   ||...|||. ||.|:.. |..|.        |.:.::.:.:|         |
  Rat   118 GYTTANGERSGSITCLQTGWSA-QPSCIKS-CDVPV--------FENAKSKNDSTWFKLNDKLDY 172

  Fly   550 VCEPGY---VLVGEAIISCGLGGEWSSKTPSCRFVDCGAPARPNRGIAILLNGTTTVNSVVKYEC 611
            .|..||   ....:..|.|...| ||.| |||..::|..|....|.:........||..::|:.|
  Rat   173 ECHIGYENKYKHTKGSIMCTTDG-WSDK-PSCYEIECSIPILDPRLVVYPRKIKYTVGDLLKFSC 235

  Fly   612 DEDHWLDGQSELYCTREGKWSGEAPVC--ELVTC-ETPSVPSGSFVIG---YDYNVHSKIQYNCD 670
            ...|.: |...:.|...| ||...|.|  ::.:| :.|.:.:|. :.|   .:|:....::|:|.
  Rat   236 RPGHRV-GPDSVQCYDFG-WSPSFPTCKGQVRSCGQYPELLNGE-IKGTKKAEYSHGDVVEYDCK 297

  Fly   671 PGHIMHGTPVLECLDSGEWSADAPYC--EYIDCGTILPIPYGSHKYVTNTTYVGSEVVFSCSQSH 733
            |..::.|...::|:| |:|:. .|.|  |...||.|..:.:||.|:.....:.|..|.|:|:::.
  Rat   298 PRFLLKGPNKIQCVD-GKWTT-LPTCVEEKRTCGDIPALEHGSVKFSVPPYHHGDSVEFTCAETF 360

  Fly   734 KLSGVLKRTCLESAVWSDASPKC----EEIRCPEPKLAAHSLLSVTGNDRMYGRTLIRTSESSQN 794
            .:.|....:|: |..|:.. |:|    :..:|..|:||            :.|...:.....:.|
  Rat   361 TMIGQRSVSCI-SGRWAQL-PRCVATVQLEKCKAPRLA------------VIGANKLEKDGLNHN 411

  Fly   795 TAQTYKIGALAKYRCERGYKMVGEALATCTDSGQWSGTIPECVYVE---CGAPEGINNGKVVLAT 856
            ::.:||.....||    ||.:       |. :|:|... |.|...|   |..|..|.|.:|:..|
  Rat   412 SSISYKCRGSQKY----GYSI-------CI-NGRWDPE-PTCTRKEKAFCPPPPQIPNAQVIDTT 463

  Fly   857 NATYYGAAVLYECNVNFKLNGVSRRLCTEHGNWSHEAPEC-VEVVCDTP------NINENLIVEA 914
            .....|..|...|...:...|....:| :||.| ...|.| .::.|..|      :|....:.:|
  Rat   464 VKYLDGEKVSVLCQDGYLTQGPEEMVC-KHGRW-QSLPRCTAKITCSQPPKIDHGSIKLPRLSDA 526

  Fly   915 GPRAV-------GSVATFKCAKG-RIMMGNDTRVCQKNGKWTGKSPTCRPVD----CGRPLAIEN 967
            |..|:       |:..::.|..| ||...|.. .|.. |||: ..|.|  |:    ||.|..|||
  Rat   527 GRDAIDSSSHEHGTTFSYVCDDGFRISKENGV-TCHM-GKWS-SPPRC--VESTGKCGPPPTIEN 586

  Fly   968 GRVIVVNDSTLYG--GSAEYHCIPNYNRIGQYLRKCTEDGAWSGKQPRC 1014
            |.:..:: ..:|.  .|.||.|...|...|.....| ::|.|. :.|:|
  Rat   587 GDITSLS-LPVYAPLSSVEYQCQSFYKMQGSKKITC-KNGEWE-EPPKC 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fwNP_001285146.1 CCP 58..112 CDD:153056
FTP 113..261 CDD:128870
CLECT 281..403 CDD:153057 6/30 (20%)
CCP 408..462 CDD:153056 13/56 (23%)
CCP 466..520 CDD:153056 16/58 (28%)
CCP 525..579 CDD:153056 16/65 (25%)
CCP 583..639 CDD:153056 15/57 (26%)
PHA02927 637..897 CDD:222943 67/275 (24%)
CCP 643..697 CDD:153056 15/59 (25%)
CCP 701..757 CDD:153056 16/59 (27%)
Sushi <799..836 CDD:278512 10/36 (28%)
Sushi 841..896 CDD:278512 15/54 (28%)
CCP 901..955 CDD:153056 17/67 (25%)
CCP 959..1015 CDD:153056 19/58 (33%)
RGD1564614NP_001128264.1 CCP 32..81 CDD:153056 13/64 (20%)
Sushi 92..143 CDD:278512 15/51 (29%)
PHA02927 143..382 CDD:222943 64/256 (25%)
CCP 207..261 CDD:153056 14/55 (25%)
CCP 267..322 CDD:153056 14/57 (25%)
CCP 328..382 CDD:153056 15/55 (27%)
Sushi 448..501 CDD:278512 15/54 (28%)
Sushi 507..571 CDD:278512 17/66 (26%)
CCP 578..632 CDD:153056 18/56 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
21.960

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