DRSC/TRiP Functional Genomics Resources

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Protein Alignment fw and cfhl2

DIOPT Version :9

Sequence 1:NP_001285146.1 Gene:fw / 32162 FlyBaseID:FBgn0001083 Length:1174 Species:Drosophila melanogaster
Sequence 2:NP_001007419.1 Gene:cfhl2 / 492777 ZFINID:ZDB-GENE-041114-123 Length:606 Species:Danio rerio


Alignment Length:531 Identity:138/531 - (25%)
Similarity:204/531 - (38%) Gaps:114/531 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   525 CPDPQPIAGGDVRFNDKRA--------GSTATYVCEPGYVLVGEAIISCGLGGEWSSK-TPSCRF 580
            |...:...|.|:.:.:...        |.|....|:.||  .|...:.|. .|:||.. ...|..
Zfish    19 CGQCEDCLGTDINYENVEPVLEWSYPDGITVRVTCQTGY--TGMYRLRCE-DGKWSENIARPCAK 80

  Fly   581 VDCGAPARPNRGIAILLNGTTTV-NSVVKYECDEDHWLDGQSELYCTREGKWSGEAPVCELVTCE 644
            ..|..|.........||:||..| .:.|.|.|.:.:.:..:......|...|....||||.||||
Zfish    81 KRCSHPGEAANADFKLLDGTEYVFGTTVVYTCKKGYKMKSRINHRTCRSQGWDNAIPVCEAVTCE 145

  Fly   645 TP-------SVPSGS--FVIGYDYNV--------HSKIQYNCDPGHIMHGTPVLECLDSGEWSAD 692
            ..       .||.|.  |..|....:        .||           .......|.|.|.|.::
Zfish   146 LTLNYEVKRVVPEGKTIFRAGERLTITRTEKTWFRSK-----------ETIKTFACQDDGTWDSN 199

  Fly   693 APYCEYIDCGTILP----IPYGSHKYVTNTTYVGSEVVFSCSQSHKLSGVLKRTCLESAVWSDAS 753
             |.||.:.....:|    |......|.||:|     :.:.|:...:....::.||...|.|:...
Zfish   200 -PGCEGMCARPDIPNAKIIGVLRQSYSTNST-----IRYKCNPGFEPEETVQITCDHQAQWTGLQ 258

  Fly   754 PKC---EEIRCPEPKLAAHSLLSVTGNDRMYGRTLIRTSESSQNTAQTYKIGALAKYRCERGYK- 814
             :|   :|: ||:..:.       .|..:...:|:|                   .|.|.:||| 
Zfish   259 -QCTAKQEV-CPDVHVK-------NGFSQPLNKTVI-------------------FYACNKGYKP 295

  Fly   815 MVGE--ALATCTDSGQWSGTIPECV-YVECGAPEGINNGKVVLATNATYYGAAVLYECNVNFKLN 876
            ..||  :..||. .|.|| .:|.|: ..||||...:.|||:.|....|   |.:  :|:..| ::
Zfish   296 FNGEWWSSVTCV-KGSWS-DVPLCIRKEECGAFPSVQNGKLKLKDQET---AEI--DCDPGF-IS 352

  Fly   877 GVSRRLCTEHGNWSHEAPECVE-VVCDTPNINENLIVEAGPRAV---GSVATFKCAKGRIMMGND 937
            ......| .:|.|  |.|.|.| |.|..|...:|.::.:.|..|   ||..|:.|....:|:|..
Zfish   353 STPSIKC-NNGTW--ETPTCNEGVRCGIPPYVDNSVIISKPEVVYIHGSSVTYTCRSPFVMIGKS 414

  Fly   938 TRVCQKNGKWTGKSPTCRPVDCGRPLAIENGRVIVVNDSTLYGGS--AEYHCIPNYNRI--GQYL 998
            |..| .||||. ::|||. ..|.|||  || .:.:.||...|...  ..|.|:..|::|  |:::
Zfish   415 TVFC-SNGKWE-ETPTCE-ARCLRPL--EN-YMSLANDKDTYQDKEILNYQCLKPYDKIPEGEWI 473

  Fly   999 RKCTEDGAWSG 1009
              | ::|.|:|
Zfish   474 --C-DNGKWTG 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fwNP_001285146.1 CCP 58..112 CDD:153056
FTP 113..261 CDD:128870
CLECT 281..403 CDD:153057
CCP 408..462 CDD:153056
CCP 466..520 CDD:153056
CCP 525..579 CDD:153056 13/62 (21%)
CCP 583..639 CDD:153056 14/56 (25%)
PHA02927 637..897 CDD:222943 70/287 (24%)
CCP 643..697 CDD:153056 14/70 (20%)
CCP 701..757 CDD:153056 12/62 (19%)
Sushi <799..836 CDD:278512 13/39 (33%)
Sushi 841..896 CDD:278512 16/54 (30%)
CCP 901..955 CDD:153056 19/56 (34%)
CCP 959..1015 CDD:153056 18/55 (33%)
cfhl2NP_001007419.1 PHA02927 34..254 CDD:222943 55/239 (23%)
CCP 83..140 CDD:153056 14/56 (25%)
CCP 209..256 CDD:153056 11/51 (22%)
PHA02927 285..464 CDD:222943 66/214 (31%)
CCP 375..429 CDD:214478 18/55 (33%)
CCP 490..544 CDD:214478
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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