DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fw and hig

DIOPT Version :9

Sequence 1:NP_001285146.1 Gene:fw / 32162 FlyBaseID:FBgn0001083 Length:1174 Species:Drosophila melanogaster
Sequence 2:NP_724773.1 Gene:hig / 35949 FlyBaseID:FBgn0010114 Length:958 Species:Drosophila melanogaster


Alignment Length:541 Identity:127/541 - (23%)
Similarity:187/541 - (34%) Gaps:160/541 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   508 CAMDGWSGKQPECLVDWCPDPQPIAGGDVRFNDKRAGSTATYVCEPGYVLVGEAIISCGLGGEWS 572
            |....|.|  |.|..:...|     .|:|:|...........:  |.::|:....||.       
  Fly   480 CVKGKWVG--PLCATNEEDD-----NGNVKFQPLYKSCHVNRI--PSHLLLSYRNISV------- 528

  Fly   573 SKTPSCRFVDCGAPARPNRG--------IAILLNGTTTVNSVVKYECDEDHWLD----------- 618
                        .|..||||        ..:|.|  |.:|  |.::....|.|.           
  Fly   529 ------------TPIPPNRGWRKTRLSKSTLLSN--TEIN--VGWDLPHGHSLQARCQELGIYKL 577

  Fly   619 -GQSELYCTREGKWSGEAPVCELVTCET----PSVPSGSFVIGYDYNVHSKI---QYNCDPGHIM 675
             |:|.:.|: .|.|:...|.|...|..|    .|.||          :..||   .::.:|..:|
  Fly   578 LGESRVLCS-NGLWAPRMPSCVPTTVLTNYSEDSAPS----------IRIKIFNGSHSFEPSGVM 631

  Fly   676 ----HGTPVLECL-----DSGEWSADAPYCEYI------------------------DCGTI--- 704
                |.|.:::|:     .:.|||..:.|.:|.                        |.||.   
  Fly   632 AVPPHSTVLMDCMYPRVRGTPEWSWTSWYMQYSTGWSPAQEEKAVRYRLSIKNIENNDSGTFTCT 696

  Fly   705 --------------------LPIPYGSHKYVTNTTYVGSEVVFSCSQSHKLSGVLKRTCLESAVW 749
                                |..|....|.......:|....:.|.:..:|.|....|||.|..|
  Fly   697 SPRGLTNSIAVVVATSTCPQLTEPLAPLKLRLEGNKLGQRAHYECPEGFRLDGAWNATCLASGNW 761

  Fly   750 SDASPKCEEIRCPEPKLAAHSLLSVTGNDRMYGRTLIRTSESSQNTAQTYKIGALAKYRCERGYK 814
            |..:|.|..|:||..:|....|..:..|...:||                     |.::|:.|:|
  Fly   762 SSPTPTCHAIQCPRLELDDPHLSLIELNTSAWGR---------------------AVFKCQWGFK 805

  Fly   815 MVGEALATCTDSGQWSGTIPECVYVECGAPEGINNGKV---VLATNATYYGAAVLYECNVNFKLN 876
            :.|.|...|..||.|||.:|.|..::|..|....||::   .|:......||.|.:.||....|.
  Fly   806 LTGPAQLDCEPSGVWSGPVPRCKVIQCVMPVAPLNGRIGGTSLSQRRLTVGALVTFSCNDGHSLV 870

  Fly   877 GVSRRLCTEHGNWSHEAPECVEVVCDTPNINENLIVEAGPRA----VGSVATFKCAKGRIMM--G 935
            |.|..:|||:|.|||..|.| :..|..|....|.::  .|..    .|...:.:|..|.:..  |
  Fly   871 GESSIICTENGQWSHSPPFC-KSQCPYPGDPPNGLI--APLKFNYDAGDYLSVQCRPGFVQSYEG 932

  Fly   936 NDTR-VCQKNGKWTGKSPTCR 955
            ...| .||.:|:|:|..|.|:
  Fly   933 PPERPKCQPDGRWSGPMPKCK 953

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fwNP_001285146.1 CCP 58..112 CDD:153056
FTP 113..261 CDD:128870
CLECT 281..403 CDD:153057
CCP 408..462 CDD:153056
CCP 466..520 CDD:153056 4/11 (36%)
CCP 525..579 CDD:153056 8/53 (15%)
CCP 583..639 CDD:153056 18/75 (24%)
PHA02927 637..897 CDD:222943 79/325 (24%)
CCP 643..697 CDD:153056 15/69 (22%)
CCP 701..757 CDD:153056 16/78 (21%)
Sushi <799..836 CDD:278512 13/36 (36%)
Sushi 841..896 CDD:278512 21/57 (37%)
CCP 901..955 CDD:153056 15/60 (25%)
CCP 959..1015 CDD:153056
higNP_724773.1 PHA02927 705..952 CDD:222943 74/270 (27%)
CCP 714..768 CDD:153056 14/53 (26%)
CCP <795..828 CDD:153056 14/53 (26%)
CCP 832..891 CDD:153056 22/59 (37%)
Sushi 894..952 CDD:278512 15/59 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19325
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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