Protein Alignment fw and Pamr1

DIOPT Version :10

• Sequence 1: NP_511136.2
• Gene: fw / 32162
• FlyBaseID: FBgn0001083
• Length: 1174
• Species: Drosophila melanogaster
• Sequence 2: XP_063139774.1
• Gene: Pamr1 / 311252
• RGDID: 1308745
• Length: 814
• Species: Rattus norvegicus
• Alignment Length: 875
• Identity: 184/875 - (21%)
• Similarity: 284/875 - (32%)
• Gaps: 292/875 - (33%)

  Fly   324 RRKSELKPQLVW--------IGAQKEPGITSRTWKWVNGDVVQKPTWGKDQPNNYNGEQNCVVLD 380
            |:.||.:..||:        ..|:...|:....|    .|||.... |.......:.....:.||
  Rat    39 RKSSEREQALVFRCFPVSRGASARASQGLRGELW----ADVVALAE-GATPVTPGSAAVGTMELD 98

  Fly   381 GGRNWLWNDVGCNLDYLHFIC------QHSPLSCGSPDAQQNTTVMGKKFTLGEKIQYTCPKGHS 439
                 .|..:|  |.:|..:.      :::.::...|.|:.|  :|.::....::|:..||....
  Rat    99 -----RWAQLG--LAFLQLLLISSLPREYTVINEACPGAEWN--IMCRECCEYDQIECICPGKKE 154

  Fly   440 LLGQTERECRLDGTWSGSSPTCKYVD--CGSLPELKFGSIHMSEERTSFGVVATYSC--HENYTL 500
            ::|.|             .|.|:..|  |.                         ||  |...|:
  Rat   155 VVGYT-------------IPCCRNEDNECD-------------------------SCLIHPGCTI 181

  Fly   501 IGNENRTCAMDGWSGKQ----------PECLVDWCPDPQPIAGGDVRFNDKRAGSTATYVCEPGY 555
            ..| .::|....|.|..          .||...|       .|||.    .|.|....  ...|.
  Rat   182 FEN-CKSCRNGSWGGTLDDFYVKGFYCAECRAGW-------YGGDC----MRCGQVLR--ASKGQ 232

  Fly   556 VLVGEAIIS--CGLGGEWSSKTPSCRFVDCGAPARPNRGIAILLNGTTTVNSVVKYECDEDHWLD 618
            :|:....::  |    ||:            ..|||  |..|.|. .:.::....|.|..|:
  Rat   233 ILLESYPLNAHC----EWT------------IHARP--GFIIQLR-FSMLSLEFDYMCQYDY--- 275

  Fly   619 GQSELYCTREGKWSGEAPVCELVTCETP----SVPSGSFVIGYDYNVHSKIQYNCDPGH------ 673
                 ...|:|..|....:..|...|.|    |..|...|:     .||....|.|..|
  Rat   276 -----VEVRDGDNSDSPLIKRLCGNERPAPIRSTGSSLHVL-----FHSDGSKNFDGFHAAFEEI 330

  Fly   674 -------IMH-GTPVLECLDSGEWSADA----PYCEYI----DCGTILPIPYGSHKYVT------ 716
                   ..| ||.:|:...|.:.:..|    |.||.:    :|.. |..|...:|.:|
  Rat   331 TACSSSPCFHDGTCILDTTGSFKCACLAGYTGPRCENLLEERNCSD-LGGPVNGYKKITGGPGLL 394

  Fly   717 NTTYV--GSEVVFSCSQSHKLSGVLKRTCLESAVWSDASPKCEEIRCPEPK---LAAHSLLSVTG 776
            |..:|  |:.|.|.|:.|:.|||..||||.::..||...|.|.: .|.|||   |....:||:..
  Rat   395 NERHVKIGTVVSFFCNGSYVLSGNEKRTCQQNGEWSGKQPVCMK-ACREPKISDLVRRRVLSMQV 458

  Fly   777 NDR------MYGRTLIRTSESSQNTAQTYK----IGAL----------AKYRC-ERGYKMVGEAL 820
            ..|      :|....   |:.....|.|.|    .|.|          .:|.| ...|..:|.:.
  Rat   459 QSRETPLHQLYSTAF---SKQKLQDASTKKPALPFGDLPPGYQHLHTQVQYECISPFYHRLGSSR 520

  Fly   821 ATCTDSGQWSGTIPECVYVECGAPEGINNGKVVLATNATYY-GAAVLYECNVNFKLNGVSRRLCT 884
            .||..:|:|||..|.|:.: ||..|.:.:.|    |..|.: ..|.:|            ||...
  Rat   521 RTCLRTGKWSGRAPSCIPI-CGKIESVASPK----TQGTRWPWQAAIY------------RRTSG 568

  Fly   885 EHGNWSHEAPECVEVVCDTPNINENLIVEAG--PRAVGSVATFKCAKGRIMMGNDTRVCQKNGKW 947
            .|....|:.  ...:||....:||..:|.|.  ...:|.|...|.|..::::|...|...::.|
  Rat   569 VHDGGLHKG--AWFLVCSGALVNERTVVVAAHCVTELGKVTIIKTADLKVVLGKFYRDDDRDEK- 630

  Fly   948 TGKSPTCRPVDCGRPLAIENGRV--IVVNDSTLYGGSAEYHCIPNYNRIGQYLRKCTEDGAWSGK 1010
                            .|:|.|:  |:::              |||:.|
  Rat   631 ----------------TIQNLRISAIILH--------------PNYDPI---------------- 649

  Fly  1011 QPRCELATAEGQETSELGTGVGIGATVIVALLVIFGLIFLYRNKARPVKNTENVQAAETKDERNA 1075
                           .|.|.:     .::.||          :|||.....:.:..|.|:|...:
  Rat   650 ---------------LLDTDI-----AVLKLL----------DKARISTRVQPICLATTRDLSAS 684

  Fly  1076 AVMSYSTLEANNRMHMDNNPSATFNTFHGG 1105
            ...|:.|:...|.:....:|....:|.|.|
  Rat   685 FEESHITVAGWNILADVRSPGFKNDTLHYG 714

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fw	NP_511136.2	CCP	58..112	CDD:153056
		FTP	113..261	CDD:128870
		CLECT	281..403	CDD:153057	18/92 (20%)
		PHA02927	<408..578	CDD:222943	34/185 (18%)
		PHA02927	<508..696	CDD:222943	46/221 (21%)
		PHA02639	643..>837	CDD:165022	68/251 (27%)
		PHA02927	798..1014	CDD:222943	49/235 (21%)
Pamr1	XP_063139774.1	None