DRSC/TRiP Functional Genomics Resources

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Protein Alignment fw and Sell

DIOPT Version :10

Sequence 1:NP_511136.2 Gene:fw / 32162 FlyBaseID:FBgn0001083 Length:1174 Species:Drosophila melanogaster
Sequence 2:XP_038946544.1 Gene:Sell / 29259 RGDID:3655 Length:460 Species:Rattus norvegicus


Alignment Length:402 Identity:94/402 - (23%)
Similarity:136/402 - (33%) Gaps:129/402 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   281 CYDFHIT-KGESFDKAQAICKQTGGDLVHDFRGATSSYILSELERRKSELKPQLVWIGAQKEPGI 344
            |:.:|.: :..:::.|:..||....|||.........|:...|.:     .|...|||.:|    
  Rat    96 CWTYHYSERSMNWENARKFCKHNYTDLVAIQNKREIEYLEKTLPK-----NPTYYWIGIRK---- 151

  Fly   345 TSRTWKWVNGD---VVQKPTWGKDQPNNYNGEQNCVVL------DGGRNWLWNDVGCN-----LD 395
            ..:||.||..:   ..:...||..:|||...:::||.:      |.|:   |||..|:     |.
  Rat   152 IGKTWTWVGTNKTLTKEAENWGTGEPNNKKSKEDCVEIYIKRERDSGK---WNDDACHKRKAALC 213

  Fly   396 YLHFICQHSPLSCGSPDAQQNTTVMGKKFTLGEKIQYTCPKGHSLLGQTERECRLDGTWSGSSPT 460
            |. ..||  |.||...               ||.::..          ....|..|..:.|  |.
  Rat   214 YT-ASCQ--PESCNRH---------------GECVETI----------NNNTCICDPGYYG--PQ 248

  Fly   461 CKYV-DCGSL--PELKFGSIHMSEERTSFGVVATYSCHENYTLIGNENRTCAMDGWSGKQPECLV 522
            |:|| .|..|  |||                             |..|              |: 
  Rat   249 CQYVIQCEPLKAPEL-----------------------------GTMN--------------CI- 269

  Fly   523 DWCPDPQPIAGGDVRFNDKRAGSTATYVCEPGYVLVGEAIISCGLGGEWSSKTPSCRFVDCGAPA 587
                  .|:  ||..|.     |...:.|..|..|:|.|...||..|.|:...|.|:.:.|...|
  Rat   270 ------HPL--GDFSFQ-----SQCAFNCSEGSELLGNAKTECGASGNWTYLEPICQVIQCMPLA 321

  Fly   588 RPNRGIA----ILLNGTTTVNSVVKYECDEDHWLDGQSELYCTREGKWSGEAPVCELVTCETPSV 648
            .|:.|..    .|.|.:.|  |...:.|.|:..|.|:.:..|...|.||..:|:|:........:
  Rat   322 APDLGTMECSHPLANFSFT--SACTFTCSEETDLIGERKTVCRSSGSWSSPSPICQKTKRSFSKI 384

  Fly   649 PSGSFVIGYDYN 660
            ..|      |||
  Rat   385 KEG------DYN 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fwNP_511136.2 CCP 58..112 CDD:153056
FTP 113..261 CDD:128870
CLECT 281..403 CDD:153057 35/136 (26%)
PHA02927 <408..578 CDD:222943 33/172 (19%)
PHA02927 <508..696 CDD:222943 39/157 (25%)
PHA02639 643..>837 CDD:165022 4/18 (22%)
PHA02927 798..1014 CDD:222943
SellXP_038946544.1 CLECT_selectins_like 97..215 CDD:153062 32/129 (25%)
EGF_CA 218..250 CDD:238011 11/60 (18%)
CCP 255..313 CDD:153056 23/114 (20%)
PHA02817 275..>384 CDD:165167 31/115 (27%)
Blue background indicates that the domain is not in the aligned region.

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